RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 NAA25Q14CX7 972 aa23.2■■□□□ 1.3
PVT1-212ENST00000521951 TBCCQ15814 346 aa23.2■■□□□ 1.3
PVT1-212ENST00000521951 PHF19Q5T6S3 580 aa23.2■■□□□ 1.3
PVT1-212ENST00000521951 FAM129CQ86XR2 697 aa23.2■■□□□ 1.3
PVT1-212ENST00000521951 LSMEM2Q8N112 164 aa23.2■■□□□ 1.3
PVT1-212ENST00000521951 C19orf47Q8N9M1 422 aaKnown RBP23.2■■□□□ 1.3
PVT1-212ENST00000521951 DYDC1Q8WWB3 177 aa23.2■■□□□ 1.3
PVT1-212ENST00000521951 WDR34Q96EX3 536 aa23.2■■□□□ 1.3
PVT1-212ENST00000521951 DRC3Q9H069 523 aa23.2■■□□□ 1.3
PVT1-212ENST00000521951 EHD1Q9H4M9 534 aa23.2■■□□□ 1.3
PVT1-212ENST00000521951 ZNF768Q9H5H4 540 aaKnown RBP23.2■■□□□ 1.3
PVT1-212ENST00000521951 ACTR8Q9H981 624 aa23.2■■□□□ 1.3
PVT1-212ENST00000521951 UBFD1O14562 309 aaKnown RBP23.19■■□□□ 1.3
PVT1-212ENST00000521951 MT-CO3P00414 261 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 OTCP00480 354 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 ANKRD34CP0C6C1 535 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 GRK2P25098 689 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 ARRB2P32121 409 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 MEF2AQ02078 507 aaPredicted RBP23.19■■□□□ 1.3
PVT1-212ENST00000521951 TRA2AQ13595 282 aaKnown RBP eCLIP23.19■■□□□ 1.35e-7■■■■□ 26.4
PVT1-212ENST00000521951 E2F2Q14209 437 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 TRIM42Q8IWZ5 723 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 DCBLD1Q8N8Z6 715 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 RCBTB1Q8NDN9 531 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 PTCD3Q96EY7 689 aaKnown RBP23.19■■□□□ 1.3
PVT1-212ENST00000521951 SLC41A2Q96JW4 573 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 TMEM74Q96NL1 305 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 CDK15Q96Q40 435 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 ZNF382Q96SR6 550 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 TRMOQ9BU70 441 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 SPNS1Q9H2V7 528 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 MANSC1Q9H8J5 431 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 ZNF225Q9UK10 706 aa23.19■■□□□ 1.3
PVT1-212ENST00000521951 CFAP54Q96N23 3096 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 MDC1Q14676 2089 aaKnown RBP23.18■■□□□ 1.3
PVT1-212ENST00000521951 CD22P20273 847 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 SERPINB5P36952 375 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 ARL1P40616 181 aaPredicted RBP23.18■■□□□ 1.3
PVT1-212ENST00000521951 INHBCP55103 352 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 STX3Q13277 289 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 HES3Q5TGS1 186 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 ATG14Q6ZNE5 492 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 MILR1Q7Z6M3 343 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 SYVN1Q86TM6 617 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 KMT5CQ86Y97 462 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 L3MBTL4Q8NA19 623 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 OR4F6Q8NGB9 312 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 RAB3IL1Q8TBN0 382 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 ZNF75CPQ92670 426 aaPredicted RBP23.18■■□□□ 1.3
PVT1-212ENST00000521951 TCTN2Q96GX1 697 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 FAM60AQ9NP50 221 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 GEMIN8Q9NWZ8 242 aaKnown RBP23.18■■□□□ 1.3
PVT1-212ENST00000521951 DLL3Q9NYJ7 618 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 BTRCQ9Y297 605 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 STK38LQ9Y2H1 464 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 RNF11Q9Y3C5 154 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 TMEM114B3SHH9 223 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 HAT1O14929 419 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 ITM2AO43736 263 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 UGDHO60701 494 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 CLDN9O95484 217 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 CHRNGP07510 517 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 EBLN1P0CF75 366 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 NELFEP18615 380 aaKnown RBP23.18■■□□□ 1.3
PVT1-212ENST00000521951 CCKBRP32239 447 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 ERVPABLB-1P60509 514 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 SH3BP2P78314 561 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 HSD11B2P80365 405 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 BST1Q10588 318 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 SLBPQ14493 270 aaKnown RBP eCLIP23.18■■□□□ 1.3
PVT1-212ENST00000521951 ARL13AQ5H913 290 aaPredicted RBP23.18■■□□□ 1.3
PVT1-212ENST00000521951 LIPJQ5W064 366 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 FBXO42Q6P3S6 717 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 GPRIN3Q6ZVF9 776 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 PLD3Q8IV08 490 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 ZNF740Q8NDX6 193 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 AGAP11Q8TF27 550 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 CKAP2Q8WWK9 683 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 AIF1LQ9BQI0 150 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 EFCAB11Q9BUY7 163 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 SHCBP1LQ9BZQ2 653 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 CHRNA10Q9GZZ6 450 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 ZNF395Q9H8N7 513 aaPredicted RBP23.18■■□□□ 1.3
PVT1-212ENST00000521951 PDE7BQ9NP56 450 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 MID1IP1Q9NPA3 183 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 SOHLH2Q9NX45 425 aa23.18■■□□□ 1.3
PVT1-212ENST00000521951 CTSVO60911 334 aa23.17■■□□□ 1.3
PVT1-212ENST00000521951 LYPLA1O75608 230 aaPredicted RBP23.17■■□□□ 1.3
PVT1-212ENST00000521951 OR4F21O95013 312 aa23.17■■□□□ 1.3
PVT1-212ENST00000521951 SLC1A6P48664 564 aa23.17■■□□□ 1.3
PVT1-212ENST00000521951 ARL4DP49703 201 aa23.17■■□□□ 1.3
PVT1-212ENST00000521951 PKNOX1P55347 436 aa23.17■■□□□ 1.3
PVT1-212ENST00000521951 ABCE1P61221 599 aaKnown RBP23.17■■□□□ 1.3
PVT1-212ENST00000521951 REEP5Q00765 189 aa23.17■■□□□ 1.3
PVT1-212ENST00000521951 ISXQ2M1V0 245 aa23.17■■□□□ 1.3
PVT1-212ENST00000521951 ATG16L1Q676U5 607 aa23.17■■□□□ 1.3
PVT1-212ENST00000521951 LETMD1Q6P1Q0 360 aa23.17■■□□□ 1.3
PVT1-212ENST00000521951 MYLK4Q86YV6 388 aaPredicted RBP23.17■■□□□ 1.3
PVT1-212ENST00000521951 D2HGDHQ8N465 521 aa23.17■■□□□ 1.3
PVT1-212ENST00000521951 C20orf27Q9GZN8 174 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms