RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 SERHLQ9NQF3 203 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 BATF3Q9NR55 127 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 FZD4Q9ULV1 537 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 CFAP20Q9Y6A4 193 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 TMEM265A0A087WTH1 108 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 A0A096LPI6 279 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 TCRBV5S2A0A599 114 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 KANSL1LA0AUZ9 987 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 PIPSLA2A3N6 862 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 TIPRLO75663 272 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 FUCA1P04066 466 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 ACP5P13686 325 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 HRH2P25021 359 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 RPL10P27635 214 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 MAT2AP31153 395 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 HSD17B2P37059 387 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 CLCNKAP51800 687 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 RPS13P62277 151 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 MRPS21P82921 87 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 MTAPQ13126 283 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 CYP51A1Q16850 503 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 SPIN4Q56A73 249 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 C1orf52Q8N6N3 182 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 CHTF18Q8WVB6 975 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 PPWD1Q96BP3 646 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 ZNF583Q96ND8 569 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 TIMM29Q9BSF4 260 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 HAUS8Q9BT25 410 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 THUMPD3Q9BV44 507 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 TRIT1Q9H3H1 467 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 RMI1Q9H9A7 625 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 SLC17A4Q9Y2C5 497 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 AP3M1Q9Y2T2 418 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 TRPM6Q9BX84 2022 aa17.82■□□□□ 0.44
TRAPPC9-210ENST00000521667 FOXE1O00358 373 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 HNRNPRO43390 633 aaKnown RBP17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 AKAP10O43572 662 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 CEACAM5P06731 702 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 KIR3DL1P43629 444 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 C21orf58P58505 322 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 BLMHQ13867 455 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 GTDC1Q4AE62 458 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 GLYATQ6IB77 296 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 CAPRIN2Q6IMN6 1127 aaKnown RBP17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 HMBOX1Q6NT76 420 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 ERMP1Q7Z2K6 904 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 EME1Q96AY2 570 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 NR1H4Q96RI1 486 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 VCXQ9H320 206 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 RPF2Q9H7B2 306 aaKnown RBP17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 CNOT11Q9UKZ1 510 aaKnown RBP17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 NCKAP1Q9Y2A7 1128 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 C2CD4DB7Z1M9 353 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 SH3BGRLO75368 114 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 UMPSP11172 480 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 OXTRP30559 389 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 RAE1P78406 368 aaKnown RBP17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 SRSF11Q05519 484 aaKnown RBP17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 SF1Q15637 639 aaKnown RBP17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 UGT8Q16880 541 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 USP30Q70CQ3 517 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 TBC1D21Q8IYX1 336 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 TMEM132CQ8N3T6 1108 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 C2orf73Q8N5S3 287 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 FAM110BQ8TC76 370 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 STARD8Q92502 1023 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 GAS2L1Q99501 681 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 APOOQ9BUR5 198 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 IKZF5Q9H5V7 419 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 FZD3Q9NPG1 666 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 SPATA7Q9P0W8 599 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 PCDHB14Q9Y5E9 798 aa17.81■□□□□ 0.44
TRAPPC9-210ENST00000521667 ASMTP46597 345 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 HNRNPFP52597 415 aaKnown RBP17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 PPP2CBP62714 309 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 PPP2CAP67775 309 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 MRPS35P82673 323 aaKnown RBP17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 CYP2A13Q16696 494 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 MTX3Q5HYI7 312 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 OR4F3Q6IEY1 312 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 AMIGO2Q86SJ2 522 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 ANKRD46Q86W74 232 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 SLC44A3Q8N4M1 653 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 DTWD1Q8N5C7 304 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 OR2T12Q8NG77 320 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 OR7A2PQ8NGA2 310 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 OR10A6Q8NH74 314 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 DNASE1L2Q92874 299 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 UBE2E3Q969T4 207 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 NSMCE2Q96MF7 247 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 CCDC115Q96NT0 180 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 INPP5KQ9BT40 448 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 SPNS1Q9H2V7 528 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 OSGEPL1Q9H4B0 414 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 KCNK12Q9HB15 430 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 DMRT3Q9NQL9 472 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 SLC6A13Q9NSD5 602 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 WDR37Q9Y2I8 494 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 COL4A2P08572 1712 aa17.8■□□□□ 0.44
TRAPPC9-210ENST00000521667 A0A1W2PPC1 479 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms