RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 F7P08709 466 aaPredicted RBP9.04□□□□□ -0.96
CLK4-209ENST00000521621 CCDC166P0CW27 439 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 ITGAXP20702 1163 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 CXCR2P25025 360 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 RPS15P62841 145 aaKnown RBP9.04□□□□□ -0.96
CLK4-209ENST00000521621 CXADRP78310 365 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 TGIF1Q15583 401 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 FAM83EQ2M2I3 478 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 ATG9BQ674R7 924 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 OVCH1Q7RTY7 1134 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 TBC1D1Q86TI0 1168 aaPredicted RBP9.04□□□□□ -0.96
CLK4-209ENST00000521621 CTAGE3PQ8IX95 158 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 AFAP1L2Q8N4X5 818 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 TTLQ8NG68 377 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 SLC5A11Q8WWX8 675 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 FAM136AQ96C01 138 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 CUTCQ9NTM9 273 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 PCDHGB7Q9Y5F8 929 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 PCM1Q15154 2024 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 HYKKA2RU49 373 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 NPEPPSL1A6NEC2 478 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 CDC7O00311 574 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 HCRTR1O43613 425 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 ALDOAP04075 364 aaKnown RBP9.04□□□□□ -0.96
CLK4-209ENST00000521621 PSMB5P28074 263 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 NAA20P61599 178 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 LAPTM5Q13571 262 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 NDUFA9Q16795 377 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 TAF1BQ53T94 588 aaPredicted RBP9.04□□□□□ -0.96
CLK4-209ENST00000521621 C10orf62Q5T681 223 aaPredicted RBP9.04□□□□□ -0.96
CLK4-209ENST00000521621 GPSM1Q86YR5 675 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 CENPLQ8N0S6 344 aaPredicted RBP9.04□□□□□ -0.96
CLK4-209ENST00000521621 N4BP2L2Q92802 583 aaPredicted RBP9.04□□□□□ -0.96
CLK4-209ENST00000521621 OR4K3Q96R72 315 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 PAFAH2Q99487 392 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 C1QTNF3Q9BXJ4 246 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 SNX15Q9NRS6 342 aa9.04□□□□□ -0.96
CLK4-209ENST00000521621 ESPNB1AK53 854 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 C9J4A7 227 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 H0YGG7 62 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 CDK2AP1O14519 115 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 UGDHO60701 494 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 KRT37O76014 449 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 SLU7O95391 586 aaKnown RBP9.03□□□□□ -0.96
CLK4-209ENST00000521621 GSTA1P08263 222 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 INHBAP08476 426 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 GCAP28676 217 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 GRK3P35626 688 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 MSH2P43246 934 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 ARF3P61204 181 aaPredicted RBP9.03□□□□□ -0.96
CLK4-209ENST00000521621 NAE1Q13564 534 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 SSPNQ14714 243 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 NAA30Q147X3 362 aaPredicted RBP9.03□□□□□ -0.96
CLK4-209ENST00000521621 PCBP2Q15366 365 aaKnown RBP eCLIP9.03□□□□□ -0.96
CLK4-209ENST00000521621 TSNQ15631 228 aaKnown RBP9.03□□□□□ -0.96
CLK4-209ENST00000521621 MUM1Q2TAK8 710 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 WASHC2DQ5SRD0 308 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 NXPE4Q6UWF7 544 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 THOC6Q86W42 341 aaKnown RBP9.03□□□□□ -0.96
CLK4-209ENST00000521621 CAMKVQ8NCB2 501 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 C7orf57Q8NEG2 295 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 STARD8Q92502 1023 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 CLIP3Q96DZ5 547 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 MAGEB10Q96LZ2 347 aaPredicted RBP9.03□□□□□ -0.96
CLK4-209ENST00000521621 ANKZF1Q9H8Y5 726 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 C14orf105Q9NVL8 296 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 ADGRE2Q9UHX3 823 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 PPT2Q9UMR5 302 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 KCNE2Q9Y6J6 123 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 TAPBPO15533 448 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 KLF7O75840 302 aaPredicted RBP9.03□□□□□ -0.96
CLK4-209ENST00000521621 CEACAM4O75871 244 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 SYF2O95926 243 aaKnown RBP9.03□□□□□ -0.96
CLK4-209ENST00000521621 C2P06681 752 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 SNRPAP09012 282 aaKnown RBP9.03□□□□□ -0.96
CLK4-209ENST00000521621 RBP1P09455 135 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 WT1P19544 449 aaPredicted RBP9.03□□□□□ -0.96
CLK4-209ENST00000521621 TCN2P20062 427 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 HPDP32754 393 aaPredicted RBP9.03□□□□□ -0.96
CLK4-209ENST00000521621 SCTRP47872 440 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 PIK3CGP48736 1102 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 DLG1Q12959 904 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 DSG2Q14126 1118 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 EFTUD2Q15029 972 aaKnown RBP eCLIP9.03□□□□□ -0.96
CLK4-209ENST00000521621 TBR1Q16650 682 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 LINC00303Q3SY05 128 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 NKAIN1Q4KMZ8 207 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 TMEM214Q6NUQ4 689 aaKnown RBP9.03□□□□□ -0.96
CLK4-209ENST00000521621 PCSK4Q6UW60 755 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 SUSD1Q6UWL2 747 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 HOMEZQ8IX15 550 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 MREGQ8N565 214 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 CAVIN3Q969G5 261 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 RERGQ96A58 199 aaPredicted RBP9.03□□□□□ -0.96
CLK4-209ENST00000521621 PTERQ96BW5 349 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 C10orf90Q96M02 699 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 CCDC77Q9BR77 488 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 TMEM79Q9BSE2 394 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 CD244Q9BZW8 370 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 RHBGQ9H310 441 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms