RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 MAU2Q9Y6X3 613 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 NUP210LQ5VU65 1888 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 IGLV3-12A0A075B6K2 115 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 H7BY64 318 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 TXNDC9O14530 226 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 NDC80O14777 642 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 DPM1O60762 260 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 FDXRP22570 491 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 RPL21P46778 160 aaKnown RBP16.25■□□□□ 0.19
SQLE-205ENST00000521232 CD97P48960 835 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 MLLT10P55197 1068 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 IL2P60568 153 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 MYBPC3Q14896 1274 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 HKDC1Q2TB90 917 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 NADK2Q4G0N4 442 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 FAM45BPQ6NSW5 357 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 ANKMY2Q8IV38 441 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 ARHGEF39Q8N4T4 335 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 CSNK1A1LQ8N752 337 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 FAM45AQ8TCE6 357 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 RERGQ96A58 199 aaPredicted RBP16.25■□□□□ 0.19
SQLE-205ENST00000521232 MIB2Q96AX9 1013 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 LINGO1Q96FE5 620 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 PRAP1Q96NZ9 151 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 SOX17Q9H6I2 414 aaPredicted RBP16.25■□□□□ 0.19
SQLE-205ENST00000521232 CCDC177Q9NQR7 707 aaPredicted RBP16.25■□□□□ 0.19
SQLE-205ENST00000521232 SEMA3GQ9NS98 782 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 ABCF3Q9NUQ8 709 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 TMEM184CQ9NVA4 438 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 CUEDC1Q9NWM3 386 aaPredicted RBP16.25■□□□□ 0.19
SQLE-205ENST00000521232 CDC23Q9UJX2 597 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 CDC14AQ9UNH5 594 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 HS3ST3B1Q9Y662 390 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 CNTRLQ7Z7A1 2325 aa16.25■□□□□ 0.19
SQLE-205ENST00000521232 KCNE1BA0A087WTH5 132 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 SOCS6O14544 535 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 HAT1O14929 419 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 KLHL41O60662 606 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 HIST1H2AGP0C0S8 130 aaPredicted RBP16.24■□□□□ 0.19
SQLE-205ENST00000521232 HIST1H2ADP20671 130 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 TBPL1P62380 186 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 OCA2Q04671 838 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 PDIA2Q13087 525 aaKnown RBP16.24■□□□□ 0.19
SQLE-205ENST00000521232 PDAP1Q13442 181 aaKnown RBP16.24■□□□□ 0.19
SQLE-205ENST00000521232 VWA5B1Q5TIE3 1220 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 AGTRAPQ6RW13 159 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 KIRREL2Q6UWL6 708 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 ADCK2Q7Z695 626 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 RBMXL3Q8N7X1 1067 aaKnown RBP16.24■□□□□ 0.19
SQLE-205ENST00000521232 GPATCH11Q8N954 259 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 BBOF1Q8ND07 529 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 FBXO36Q8NEA4 188 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 SPATA4Q8NEY3 305 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 STT3BQ8TCJ2 826 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 PDLIM5Q96HC4 596 aaKnown RBP16.24■□□□□ 0.19
SQLE-205ENST00000521232 CABS1Q96KC9 395 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 HIST1H2AHQ96KK5 128 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 OLFM1Q99784 485 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 HIST1H2AJQ99878 128 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 H2AFJQ9BTM1 129 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 ZNF552Q9H707 407 aaPredicted RBP16.24■□□□□ 0.19
SQLE-205ENST00000521232 ZNF282Q9UDV7 671 aaPredicted RBP16.24■□□□□ 0.19
SQLE-205ENST00000521232 PLAAQ9Y263 795 aa16.24■□□□□ 0.19
SQLE-205ENST00000521232 FAM187AA6NFU0 413 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 SORBS2O94875 1100 aaKnown RBP16.23■□□□□ 0.19
SQLE-205ENST00000521232 ZGLP1P0C6A0 271 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 CCND1P24385 295 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 SLC26A3P40879 764 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 KLC1Q07866 573 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 MGAT5Q09328 741 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 AIMP2Q13155 320 aaKnown RBP16.23■□□□□ 0.19
SQLE-205ENST00000521232 RAPSNQ13702 412 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 FAM53BQ14153 422 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 FASTKD3Q14CZ7 662 aaKnown RBP16.23■□□□□ 0.19
SQLE-205ENST00000521232 PHKG1Q16816 387 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 ZXDCQ2QGD7 858 aaPredicted RBP16.23■□□□□ 0.19
SQLE-205ENST00000521232 PRAMEF13Q5VWM6 474 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 JMJD6Q6NYC1 403 aaPredicted RBP16.23■□□□□ 0.19
SQLE-205ENST00000521232 IGFL3Q6UXB1 125 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 MBOAT1Q6ZNC8 495 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 SHISA6Q6ZSJ9 500 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 MAATS1Q7Z4T9 603 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 PLD3Q8IV08 490 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 MIEF2Q96C03 454 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 ERP44Q9BS26 406 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 SGPP1Q9BX95 441 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 ATG10Q9H0Y0 220 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 ZFATQ9P243 1243 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 FBXL4Q9UKA2 621 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 PSAT1Q9Y617 370 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.23■□□□□ 0.195e-9■■■□□ 18.3
SQLE-205ENST00000521232 LRRK2Q5S007 2527 aa16.23■□□□□ 0.19
SQLE-205ENST00000521232 HECTD1Q9ULT8 2610 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 TTLL8A6PVC2 850 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 MASP2O00187 686 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 P2RX6O15547 441 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 PRPF4O43172 522 aaKnown RBP eCLIP16.22■□□□□ 0.191e-6■■□□□ 13.4
SQLE-205ENST00000521232 FOXS1O43638 330 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 NPPBP16860 134 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 FBLP22087 321 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms