RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	EME2	A4GXA9	379 aa	Predicted RBP	11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	EPOP	A6NHQ4	379 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	DEAF1	O75398	565 aa	Predicted RBP	11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	H6PD	O95479	791 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	IL1RN	P18510	177 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	TAS2R38	P59533	333 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	NKG7	Q16617	165 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	DUOXA1	Q1HG43	343 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	MED27	Q6P2C8	311 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	PNCK	Q6P2M8	343 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	CRTC3	Q6UUV7	619 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	ENPP6	Q6UWR7	440 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	UNC5D	Q6UXZ4	953 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	TMPRSS11B	Q86T26	416 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	SATL1	Q86VE3	508 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	FAM120B	Q96EK7	910 aa	Known RBP	11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	PBX4	Q9BYU1	374 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	EHD1	Q9H4M9	534 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	IGFLR1	Q9H665	355 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	FAM120C	Q9NX05	1096 aa	Known RBP	11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	SIRT5	Q9NXA8	310 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	LIMD1	Q9UGP4	676 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	ERVK-11	Q9UQG0	969 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	SH2B3	Q9UQQ2	575 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362		A0A1B0GTW7	788 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362		H3BNH8	94 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	FOXE1	O00358	373 aa	Predicted RBP	11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	CREG1	O75629	220 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	MYO1D	O94832	1006 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	GNAO1	P09471	354 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	C1GALT1C1L	P0DN25	315 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	PCNA	P12004	261 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	RPS9	P46781	194 aa	Known RBP	11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	RPA4	Q13156	261 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	SLC14A1	Q13336	389 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	PON2	Q15165	354 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	SF1	Q15637	639 aa	Known RBP	11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	SPIN4	Q56A73	249 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	CATSPERE	Q5SY80	951 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	AGBL4	Q5VU57	503 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	KRT80	Q6KB66	452 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	GALNT18	Q6P9A2	607 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	TBPL2	Q6SJ96	375 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	GPR155	Q7Z3F1	870 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	CAMKMT	Q7Z624	323 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	SERPINA11	Q86U17	422 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	HEATR4	Q86WZ0	1026 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	C1orf52	Q8N6N3	182 aa	Known RBP	11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	METTL25	Q8N6Q8	603 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	STARD8	Q92502	1023 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	FAM162A	Q96A26	154 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	REPS1	Q96D71	796 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	ERLEC1	Q96DZ1	483 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	VPS50	Q96JG6	964 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	EFCAB11	Q9BUY7	163 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	RSPH9	Q9H1X1	276 aa	Predicted RBP	11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	CD320	Q9NPF0	282 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	SMPD3	Q9NY59	655 aa	Predicted RBP	11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	NDUFA13	Q9P0J0	144 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	BTBD3	Q9Y2F9	522 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	TMEM98	Q9Y2Y6	226 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	STON1	Q9Y6Q2	735 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	CROCC	Q5TZA2	2017 aa		11.94	□□□□□ -0.5
SPIDR-210	ENST00000519362	TNRC18	O15417	2968 aa	Predicted RBP	11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	IGLON5	A6NGN9	336 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	FPGT	O14772	594 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	SCAMP2	O15127	329 aa	Known RBP	11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	MID1	O15344	667 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	YY2	O15391	372 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	KIF1C	O43896	1103 aa	Known RBP	11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	COX7A2	P14406	83 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	ZNF23	P17027	643 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	ASMT	P46597	345 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	RPS13	P62277	151 aa	Known RBP	11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	CDK3	Q00526	305 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	SLBP	Q14493	270 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	STARD3	Q14849	445 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	AGER	Q15109	404 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	CYBRD1	Q53TN4	286 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	DOK6	Q6PKX4	331 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	FKBP9P1	Q75LS8	142 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	PDZD3	Q86UT5	571 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	YAF2	Q8IY57	180 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	LMNTD1	Q8N9Z9	388 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	FAM47B	Q8NA70	645 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	FBXO30	Q8TB52	745 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	NETO1	Q8TDF5	533 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	SLC5A11	Q8WWX8	675 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	POP5	Q969H6	163 aa	Known RBP	11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	PANX1	Q96RD7	426 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	MYADM	Q96S97	322 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	TSC22D3	Q99576	134 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	MAGIX	Q9H6Y5	334 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	SUFU	Q9UMX1	484 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	MAPRE3	Q9UPY8	281 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	MYRF	Q9Y2G1	1151 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	DYRK1B	Q9Y463	629 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	PIPSL	A2A3N6	862 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms