RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 POLR3HQ9Y535 204 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 PCDHB7Q9Y5E2 793 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC22A7Q9Y694 548 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 PRG4Q92954 1404 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 MARF1Q9Y4F3 1742 aaKnown RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 MYH3P11055 1940 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 TET3O43151 1660 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 COL15A1P39059 1388 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 TNRQ92752 1358 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 A0A075B6Q4 140 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 A0A1B0GVI7 797 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZC3H12DA2A288 527 aaKnown RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 FAM83GA6ND36 823 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 METTL15A6NJ78 407 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 EFCAB9A8MZ26 197 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 KPNA7A9QM74 516 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 TRIM49D1C9J1S8 452 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 G3V2T6 193 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 H0YIV9 168 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 TEX46H3BTG2 121 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 H7C1Q1 480 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 GRM8O00222 908 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 MYL12BO14950 172 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC16A3O15427 465 aaKnown RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ORC5O43913 435 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 SCO1O75880 301 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 KRT33AO76009 404 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 INMTO95050 263 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 OAZ2O95190 189 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 PAK4O96013 591 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 POMCP01189 267 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 EPOP01588 193 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 IGHV2-70P01814 119 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ITGAVP06756 1048 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 THEGLP0DJG4 465 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC2A1P11166 492 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 CYP19A1P11511 503 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 MYL12AP19105 171 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 OGNP20774 298 aaKnown RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 CD72P21854 359 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 FBLN1P23142 703 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 CRHBPP24387 322 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 DDX6P26196 483 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 PAX6P26367 422 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 HTR1BP28222 390 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 LAP3P28838 519 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 FMO4P31512 558 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ATP5C1P36542 298 aaKnown RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 GRIA3P42263 894 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 GABRB2P47870 512 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 LIMS1P48059 325 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC1A6P48664 564 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 NUMBP49757 651 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 PRELPP51888 382 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 MAP2K6P52564 334 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ATXN3P54252 364 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 BCAT1P54687 386 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 MLLT10P55197 1068 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ANTXR2P58335 489 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 KIAA1024LP59773 190 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 RAB5BP61020 215 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ADARB1P78563 741 aaKnown RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 GTF2BQ00403 316 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 GCNT1Q02742 428 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 CHRNDQ07001 517 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 BIKQ13323 160 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF177Q13360 481 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ASAH1Q13510 395 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 CHRNA2Q15822 529 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 GUCA2BQ16661 112 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 TIGD6Q17RP2 521 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 MINDY4Q4G0A6 757 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 TEX44Q53QW1 395 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 C6orf141Q5SZD1 244 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 GPRC6AQ5T6X5 926 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 SYT6Q5T7P8 510 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 MANEALQ5VSG8 457 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 DCAF12L1Q5VU92 463 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 XAF1Q6GPH4 301 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ARMC6Q6NXE6 501 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 PKN3Q6P5Z2 889 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 KCNT2Q6UVM3 1135 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 C16orf54Q6UWD8 224 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 LIPIQ6XZB0 460 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 TIFABQ6ZNK6 161 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 FAM122BQ7Z309 247 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 GPR155Q7Z3F1 870 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 DENND6AQ8IWF6 608 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 SPAG16Q8N0X2 631 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 CRYBG2Q8N1P7 616 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ARL14Q8N4G2 192 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 CBR4Q8N4T8 237 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 PARP16Q8N5Y8 322 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 YIPF7Q8N8F6 280 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF527Q8NB42 609 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 CHDHQ8NE62 594 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 MCPH1Q8NEM0 835 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 IPMKQ8NFU5 416 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ITFG1Q8TB96 612 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms