RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 EMC1Q8N766 993 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 MDS2Q8NDY4 140 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 OR10G2Q8NGC3 310 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 OR13C3Q8NGS6 347 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 PHLDA1Q8WV24 401 aaPredicted RBP-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 RAB40AQ8WXH6 277 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 ZBED6CLQ96FA7 236 aaPredicted RBP-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 CASD1Q96PB1 797 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 NRTNQ99748 197 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 MYD88Q99836 296 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 C1QTNF1Q9BXJ1 281 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 NYXQ9GZU5 481 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 ARRDC1-AS1Q9H2J1 176 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 SLA2Q9H6Q3 261 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 PNPLA8Q9NP80 782 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 DUS2Q9NX74 493 aaKnown RBP-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 CD207Q9UJ71 328 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 CDC23Q9UJX2 597 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 DAPP1Q9UN19 280 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 FAM96BQ9Y3D0 163 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 CEPT1Q9Y6K0 416 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 TNCP24821 2201 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 K7EM74 188 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 SURF4O15260 269 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 LRRTM2O43300 516 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 OR6B1O95007 311 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 HEXAP06865 529 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 DARSP14868 501 aaKnown RBP-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 PKLRP30613 574 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 TGFBR2P37173 567 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 RPL21P46778 160 aaKnown RBP-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 OR3A2P47893 321 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 DIO3P55073 304 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 ADARP55265 1226 aaKnown RBP-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 CDC16Q13042 620 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 BAMBIQ13145 260 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 ORC2Q13416 577 aaPredicted RBP-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 MSLNQ13421 630 aaPredicted RBP-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 CRMP1Q14194 572 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 PCK2Q16822 640 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 SPATA46Q5T0L3 261 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 NAA35Q5VZE5 725 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 BRINP3Q76B58 766 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 R3HCC1LQ7Z5L2 792 aaKnown RBP-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 TMEM25Q86YD3 366 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 RAVER1Q8IY67 606 aaKnown RBP-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 MTURNQ8N3F0 131 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 NPEPL1Q8NDH3 523 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 OR5M8Q8NGP6 311 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 OR52N5Q8NH56 324 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 MASTLQ96GX5 879 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 LRGUKQ96M69 825 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 PCGF1Q9BSM1 259 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 NUP85Q9BW27 656 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 STRADBQ9C0K7 418 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 BRD8Q9H0E9 1235 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 S1PR5Q9H228 398 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 ZNF702PQ9H963 129 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 SIRT7Q9NRC8 400 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 STK39Q9UEW8 545 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 GGA2Q9UJY4 613 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 PILRAQ9UKJ1 303 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 RPH3ALQ9UNE2 315 aa-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 DDX52Q9Y2R4 599 aaKnown RBP eCLIP-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 MRPS18CQ9Y3D5 142 aaKnown RBP-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 SPIN1Q9Y657 262 aaPredicted RBP-1.43□□□□□ -2.64
RNU6-539P-201ENST00000516665 HMCN2Q8NDA2 5059 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 EIF4E1BA6NMX2 242 aaKnown RBP-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 TFP02787 698 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 MUC1P15941 1255 aaPredicted RBP-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 HOXC9P31274 260 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 APLNRP35414 380 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 ZNF83P51522 516 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 GUCY2FP51841 1108 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 GALCP54803 685 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 MAZP56270 477 aaKnown RBP-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 SERTAD2Q14140 314 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 GGTLC2Q14390 218 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 VEPH1Q14D04 833 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 TAF5Q15542 800 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 RAB30Q15771 203 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 KYAT1Q16773 422 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 TMEM266Q2M3C6 531 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 POM121L1PQ3SYA9 428 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 TTC22Q5TAA0 569 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 NCR3LG1Q68D85 454 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 LIN54Q6MZP7 749 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 UGT3A1Q6NUS8 523 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 JAZF1Q86VZ6 243 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 KCTD6Q8NC69 237 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 OR6J1Q8NGC5 347 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 OR1J2Q8NGS2 313 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 UBALD1Q8TB05 177 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 BLOC1S5Q8TDH9 187 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 CHCHD10Q8WYQ3 142 aaPredicted RBP-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 ROBO4Q8WZ75 1007 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 RDH5Q92781 318 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 ZNF560Q96MR9 790 aa-1.44□□□□□ -2.64
RNU6-539P-201ENST00000516665 LPAR4Q99677 370 aa-1.44□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms