RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 CDC23Q9UJX2 597 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 E7ESA3 106 aa23.36■■□□□ 1.33
SNF8-213ENST00000514929 H7BY64 318 aa23.36■■□□□ 1.33
SNF8-213ENST00000514929 FDXRP22570 491 aa23.36■■□□□ 1.33
SNF8-213ENST00000514929 MMP11P24347 488 aa23.36■■□□□ 1.33
SNF8-213ENST00000514929 EMP3P54852 163 aa23.36■■□□□ 1.33
SNF8-213ENST00000514929 ETF1P62495 437 aaKnown RBP23.36■■□□□ 1.33
SNF8-213ENST00000514929 RELAQ04206 551 aa23.36■■□□□ 1.33
SNF8-213ENST00000514929 RAPSNQ13702 412 aa23.36■■□□□ 1.33
SNF8-213ENST00000514929 AGTRAPQ6RW13 159 aa23.36■■□□□ 1.33
SNF8-213ENST00000514929 MBOAT1Q6ZNC8 495 aa23.36■■□□□ 1.33
SNF8-213ENST00000514929 ZBED8Q8IZ13 594 aa23.36■■□□□ 1.33
SNF8-213ENST00000514929 ALKBH8Q96BT7 664 aaKnown RBP23.36■■□□□ 1.33
SNF8-213ENST00000514929 PRAP1Q96NZ9 151 aa23.36■■□□□ 1.33
SNF8-213ENST00000514929 OR2A5Q96R48 311 aa23.36■■□□□ 1.33
SNF8-213ENST00000514929 OLFM1Q99784 485 aa23.36■■□□□ 1.33
SNF8-213ENST00000514929 ERP44Q9BS26 406 aa23.36■■□□□ 1.33
SNF8-213ENST00000514929 PCBD2Q9H0N5 130 aa23.36■■□□□ 1.33
SNF8-213ENST00000514929 CDC14AQ9UNH5 594 aa23.36■■□□□ 1.33
SNF8-213ENST00000514929 RUVBL1Q9Y265 456 aaKnown RBP23.36■■□□□ 1.33
SNF8-213ENST00000514929 HAT1O14929 419 aa23.35■■□□□ 1.33
SNF8-213ENST00000514929 FBLP22087 321 aaKnown RBP23.35■■□□□ 1.33
SNF8-213ENST00000514929 PGGT1BP53609 377 aa23.35■■□□□ 1.33
SNF8-213ENST00000514929 OCA2Q04671 838 aa23.35■■□□□ 1.33
SNF8-213ENST00000514929 C2orf54Q08AI8 447 aa23.35■■□□□ 1.33
SNF8-213ENST00000514929 PHKG1Q16816 387 aa23.35■■□□□ 1.33
SNF8-213ENST00000514929 HKDC1Q2TB90 917 aa23.35■■□□□ 1.33
SNF8-213ENST00000514929 SYT10Q6XYQ8 523 aa23.35■■□□□ 1.33
SNF8-213ENST00000514929 STRA8Q7Z7C7 330 aa23.35■■□□□ 1.33
SNF8-213ENST00000514929 PLD3Q8IV08 490 aa23.35■■□□□ 1.33
SNF8-213ENST00000514929 NACC2Q96BF6 587 aa23.35■■□□□ 1.33
SNF8-213ENST00000514929 TRIM54Q9BYV2 358 aa23.35■■□□□ 1.33
SNF8-213ENST00000514929 ATG10Q9H0Y0 220 aa23.35■■□□□ 1.33
SNF8-213ENST00000514929 SYNPO2LQ9H987 977 aa23.35■■□□□ 1.33
SNF8-213ENST00000514929 TMEM184CQ9NVA4 438 aa23.35■■□□□ 1.33
SNF8-213ENST00000514929 AGPSO00116 658 aa23.34■■□□□ 1.33
SNF8-213ENST00000514929 TXNDC9O14530 226 aa23.34■■□□□ 1.33
SNF8-213ENST00000514929 RAD51CO43502 376 aa23.34■■□□□ 1.33
SNF8-213ENST00000514929 TSPAN12O95859 305 aa23.34■■□□□ 1.33
SNF8-213ENST00000514929 SAT1P21673 171 aa23.34■■□□□ 1.33
SNF8-213ENST00000514929 HRH2P25021 359 aa23.34■■□□□ 1.33
SNF8-213ENST00000514929 NAE1Q13564 534 aa23.34■■□□□ 1.33
SNF8-213ENST00000514929 IGFBP7Q16270 282 aa23.34■■□□□ 1.33
SNF8-213ENST00000514929 GALNT16Q8N428 558 aa23.34■■□□□ 1.33
SNF8-213ENST00000514929 ATP13A2Q9NQ11 1180 aa23.34■■□□□ 1.33
SNF8-213ENST00000514929 ARL15Q9NXU5 204 aa23.34■■□□□ 1.33
SNF8-213ENST00000514929 MOCS1Q9NZB8 636 aa23.34■■□□□ 1.33
SNF8-213ENST00000514929 WHRNQ9P202 907 aa23.34■■□□□ 1.33
SNF8-213ENST00000514929 ZNF282Q9UDV7 671 aaPredicted RBP23.34■■□□□ 1.33
SNF8-213ENST00000514929 PSAT1Q9Y617 370 aa23.34■■□□□ 1.33
SNF8-213ENST00000514929 HEATR5BQ9P2D3 2071 aa23.34■■□□□ 1.33
SNF8-213ENST00000514929 VSTM2BA6NLU5 285 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 PRPF4O43172 522 aaKnown RBP eCLIP23.33■■□□□ 1.33
SNF8-213ENST00000514929 DPM1O60762 260 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 CCND1P24385 295 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 FOXK1P85037 733 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 RBBP7Q16576 425 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 NADK2Q4G0N4 442 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 GARNL3Q5VVW2 1013 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 CAPN12Q6ZSI9 719 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 SLC26A11Q86WA9 606 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 C17orf64Q86WR6 236 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 HPS6Q86YV9 775 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 PRSS58Q8IYP2 241 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 STT3BQ8TCJ2 826 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 PYROXD1Q8WU10 500 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 MIEF2Q96C03 454 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 MVB12AQ96EY5 273 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 SMAD5Q99717 465 aaKnown RBP23.33■■□□□ 1.33
SNF8-213ENST00000514929 CRB3Q9BUF7 120 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 YIPF2Q9BWQ6 316 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 SEMA3GQ9NS98 782 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 NSMCE4AQ9NXX6 385 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 FBXL4Q9UKA2 621 aa23.33■■□□□ 1.33
SNF8-213ENST00000514929 MASP2O00187 686 aa23.32■■□□□ 1.32
SNF8-213ENST00000514929 KLHL41O60662 606 aa23.32■■□□□ 1.32
SNF8-213ENST00000514929 ZGLP1P0C6A0 271 aa23.32■■□□□ 1.32
SNF8-213ENST00000514929 MLLT10P55197 1068 aa23.32■■□□□ 1.32
SNF8-213ENST00000514929 AP1S2P56377 157 aa23.32■■□□□ 1.32
SNF8-213ENST00000514929 RPS15AP62244 130 aaKnown RBP23.32■■□□□ 1.32
SNF8-213ENST00000514929 MYBPC3Q14896 1274 aa23.32■■□□□ 1.32
SNF8-213ENST00000514929 VWA5B1Q5TIE3 1220 aa23.32■■□□□ 1.32
SNF8-213ENST00000514929 ZC3HC1Q86WB0 502 aaKnown RBP23.32■■□□□ 1.32
SNF8-213ENST00000514929 VPS50Q96JG6 964 aa23.32■■□□□ 1.32
SNF8-213ENST00000514929 SAYSD1Q9NPB0 183 aa23.32■■□□□ 1.32
SNF8-213ENST00000514929 HS3ST3B1Q9Y662 390 aa23.32■■□□□ 1.32
SNF8-213ENST00000514929 ANKRD12Q6UB98 2062 aa23.32■■□□□ 1.32
SNF8-213ENST00000514929 FAM95CA0A1B0GW59 222 aa23.31■■□□□ 1.32
SNF8-213ENST00000514929 TTLL8A6PVC2 850 aa23.31■■□□□ 1.32
SNF8-213ENST00000514929 P2RX6O15547 441 aa23.31■■□□□ 1.32
SNF8-213ENST00000514929 ALPPP05187 535 aa23.31■■□□□ 1.32
SNF8-213ENST00000514929 ANXA5P08758 320 aa23.31■■□□□ 1.32
SNF8-213ENST00000514929 KLC1Q07866 573 aa23.31■■□□□ 1.32
SNF8-213ENST00000514929 AIMP2Q13155 320 aaKnown RBP23.31■■□□□ 1.32
SNF8-213ENST00000514929 CBLBQ13191 982 aa23.31■■□□□ 1.32
SNF8-213ENST00000514929 DSG2Q14126 1118 aa23.31■■□□□ 1.32
SNF8-213ENST00000514929 NDUFA9Q16795 377 aa23.31■■□□□ 1.32
SNF8-213ENST00000514929 CAPN13Q6MZZ7 669 aaPredicted RBP23.31■■□□□ 1.32
SNF8-213ENST00000514929 LCTLQ6UWM7 567 aa23.31■■□□□ 1.32
SNF8-213ENST00000514929 MMABQ96EY8 250 aaPredicted RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms