RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 MIEF2Q96C03 454 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 CAPZA3Q96KX2 299 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 NAPGQ99747 312 aaPredicted RBP9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 CRB3Q9BUF7 120 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 SLAMF7Q9NQ25 335 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 CCDC177Q9NQR7 707 aaPredicted RBP9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 TAS2R13Q9NYV9 303 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 LUZP4Q9P127 313 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 SLC17A6Q9P2U8 582 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 ZNF282Q9UDV7 671 aaPredicted RBP9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 VPS4AQ9UN37 437 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 PDE10AQ9Y233 779 aa9.96□□□□□ -0.82
HMGXB3-205ENST00000514469 SPTBP11277 2137 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 A0A1W2PQ72 361 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 TXNDC9O14530 226 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 TP73O15350 636 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 SLC16A5O15375 505 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 PRPF4O43172 522 aaKnown RBP eCLIP9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 SEC31AO94979 1220 aaKnown RBP9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 TSPAN12O95859 305 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 GNLYP22749 145 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 HRH2P25021 359 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 ITGA3P26006 1051 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 SLC26A3P40879 764 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 ELK3P41970 407 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 RGS4P49798 205 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 GNG11P61952 73 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 OCA2Q04671 838 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 FRG1Q14331 258 aaKnown RBP9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 TEDDM1Q5T9Z0 273 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 THEMIS2Q5TEJ8 643 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 HIBCHQ6NVY1 386 aaPredicted RBP9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 PAQR3Q6TCH7 311 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 IGFL2Q6UWQ7 119 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 MBOAT1Q6ZNC8 495 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 ADCK2Q7Z695 626 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 KLHL7Q8IXQ5 586 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 PDIK1LQ8N165 341 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 MYO1HQ8N1T3 1032 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 AMER3Q8N944 861 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 TM9SF4Q92544 642 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 RERGQ96A58 199 aaPredicted RBP9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 LRRC39Q96DD0 335 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 CCDC138Q96M89 665 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 PWWP2AQ96N64 755 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 MESP1Q9BRJ9 268 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 TRIM51Q9BSJ1 452 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 PARVBQ9HBI1 364 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 ZBTB20Q9HC78 741 aaPredicted RBP9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 ABCF3Q9NUQ8 709 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 C14orf105Q9NVL8 296 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 C3orf18Q9UK00 162 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 CORO1CQ9ULV4 474 aaPredicted RBP9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 CDC14AQ9UNH5 594 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 CHMP2BQ9UQN3 213 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 SH2B3Q9UQQ2 575 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 B3GNT3Q9Y2A9 372 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 SAR1BQ9Y6B6 198 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 TEX264Q9Y6I9 313 aa9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 UTP20O75691 2785 aaKnown RBP9.95□□□□□ -0.82
HMGXB3-205ENST00000514469 PRRC2CQ9Y520 2896 aaKnown RBP9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 PTPN13Q12923 2485 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 H7BY64 318 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 CCDC188H7C350 402 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 MAP2K7O14733 419 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 FANCGO15287 622 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 TTI1O43156 1089 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 FOXS1O43638 330 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 HPP00738 406 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 ACPPP15309 386 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 FDXRP22570 491 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 VARSP26640 1264 aaKnown RBP9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 ITGA8P53708 1063 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 RPS15AP62244 130 aaKnown RBP9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 SNRPNP63162 240 aaKnown RBP9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 Q0VFX4 171 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 HIF1AQ16665 826 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 PHKG1Q16816 387 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 PLEKHN1Q494U1 663 aaPredicted RBP9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 VWA2Q5GFL6 755 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 CRB2Q5IJ48 1285 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 HECTD2Q5U5R9 776 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 ATG9BQ674R7 924 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 TRMT10BQ6PF06 316 aaKnown RBP9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 AGTRAPQ6RW13 159 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 Q6ZS92 163 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 VN1R4Q7Z5H5 301 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 PLD3Q8IV08 490 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 PRSS58Q8IYP2 241 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 IQCKQ8N0W5 287 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 MCOLN3Q8TDD5 553 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 PPP4R1Q8TF05 950 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 LINGO1Q96FE5 620 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 CFAP36Q96G28 342 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 SNF8Q96H20 258 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 VPS50Q96JG6 964 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 PRAP1Q96NZ9 151 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 WDR77Q9BQA1 342 aaPredicted RBP9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 SGPP1Q9BX95 441 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 TGIF2Q9GZN2 237 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms