RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 RPS13P62277 151 aaKnown RBP14.41□□□□□ -0.1
VCAN-211ENST00000513984 RAE1P78406 368 aaKnown RBP14.41□□□□□ -0.1
VCAN-211ENST00000513984 SFSWAPQ12872 951 aaKnown RBP14.41□□□□□ -0.1
VCAN-211ENST00000513984 HIST2H2ACQ16777 129 aaPredicted RBP14.41□□□□□ -0.1
VCAN-211ENST00000513984 GRAMD1BQ3KR37 738 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 FBXO43Q4G163 708 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 AASDHQ4L235 1098 aaPredicted RBP14.41□□□□□ -0.1
VCAN-211ENST00000513984 PYCR3Q53H96 274 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 EOGTQ5NDL2 527 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 IER5LQ5T953 404 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 COL13A1Q5TAT6 717 aaPredicted RBP14.41□□□□□ -0.1
VCAN-211ENST00000513984 HIST2H2AA3Q6FI13 130 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 PROSER1Q86XN7 944 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 SYT12Q8IV01 421 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 PLCD3Q8N3E9 789 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 CANT1Q8WVQ1 401 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 PAIP1Q9H074 479 aaKnown RBP14.41□□□□□ -0.1
VCAN-211ENST00000513984 FZD3Q9NPG1 666 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 SIRT5Q9NXA8 310 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 SLC25A37Q9NYZ2 338 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 LIMD1Q9UGP4 676 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 AP3M1Q9Y2T2 418 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 DTNAQ9Y4J8 743 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 CFAP20Q9Y6A4 193 aaKnown RBP14.41□□□□□ -0.1
VCAN-211ENST00000513984 TCRBV5S2A0A599 114 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 DHRS12A0PJE2 317 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 CACNB4O00305 520 aaPredicted RBP14.41□□□□□ -0.1
VCAN-211ENST00000513984 RPL10P27635 214 aaKnown RBP14.41□□□□□ -0.1
VCAN-211ENST00000513984 AQP4P55087 323 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 OR4D2P58180 307 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 PLIN5Q00G26 463 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 RUNDC3AQ59EK9 446 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 THEMIS2Q5TEJ8 643 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 GALNT18Q6P9A2 607 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 TMEM92Q6UXU6 159 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 GPR180Q86V85 440 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 C1orf52Q8N6N3 182 aaKnown RBP14.41□□□□□ -0.1
VCAN-211ENST00000513984 DENND6BQ8NEG7 585 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 RPLP0P6Q8NHW5 317 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 STARD8Q92502 1023 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 UBE2E3Q969T4 207 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 MSANTD3Q96H12 275 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 ITCHQ96J02 903 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 SH3GL1Q99961 368 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 SPNS1Q9H2V7 528 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 DMRT3Q9NQL9 472 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 MAGEL2Q9UJ55 1249 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 USP22Q9UPT9 525 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 MAPRE3Q9UPY8 281 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 WDR37Q9Y2I8 494 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 TNRC18O15417 2968 aaPredicted RBP14.4□□□□□ -0.1
VCAN-211ENST00000513984 PLXND1Q9Y4D7 1925 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 SNRNP200O75643 2136 aaKnown RBP14.4□□□□□ -0.1
VCAN-211ENST00000513984 SHISA7A6NL88 538 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 SLC31A1O15431 190 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 LRATO95237 230 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 GPIP06744 558 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 ACADMP11310 421 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 MTHFD1P11586 935 aaKnown RBP14.4□□□□□ -0.1
VCAN-211ENST00000513984 NDUFV2P19404 249 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 HRH2P25021 359 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 PTPN6P29350 595 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 PIK3CBP42338 1070 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 KIR3DL1P43629 444 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 ASMTP46597 345 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 KIAA1024LP59773 190 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 CTBSQ01459 385 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 SRSF11Q05519 484 aaKnown RBP14.4□□□□□ -0.1
VCAN-211ENST00000513984 CYP4F3Q08477 520 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 SMAD4Q13485 552 aaKnown RBP14.4□□□□□ -0.1
VCAN-211ENST00000513984 CCINQ13939 588 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 UGT8Q16880 541 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 IRGCQ6NXR0 463 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 CHRDL2Q6WN34 429 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 TRIM69Q86WT6 500 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 FAM129CQ86XR2 697 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 ADGRG5Q8IZF4 528 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 ZNF583Q96ND8 569 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 CCDC115Q96NT0 180 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 BTBD9Q96Q07 612 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 PCBD2Q9H0N5 130 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 OSGEPL1Q9H4B0 414 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 PELI2Q9HAT8 420 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.4□□□□□ -0.1
VCAN-211ENST00000513984 MMP17Q9ULZ9 603 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 SUFUQ9UMX1 484 aa14.4□□□□□ -0.1
VCAN-211ENST00000513984 FANCMQ8IYD8 2048 aa14.39□□□□□ -0.11
VCAN-211ENST00000513984 MBTPS2O43462 519 aa14.39□□□□□ -0.11
VCAN-211ENST00000513984 CDH1P12830 882 aa14.39□□□□□ -0.11
VCAN-211ENST00000513984 PSMA4P25789 261 aaKnown RBP14.39□□□□□ -0.11
VCAN-211ENST00000513984 TIA1P31483 386 aaKnown RBP eCLIP14.39□□□□□ -0.11
VCAN-211ENST00000513984 GTF2A1P52655 376 aaPredicted RBP14.39□□□□□ -0.11
VCAN-211ENST00000513984 MLF2Q15773 248 aaPredicted RBP14.39□□□□□ -0.11
VCAN-211ENST00000513984 PGS1Q32NB8 556 aa14.39□□□□□ -0.11
VCAN-211ENST00000513984 ANO7Q6IWH7 933 aa14.39□□□□□ -0.11
VCAN-211ENST00000513984 DUS1LQ6P1R4 473 aaKnown RBP14.39□□□□□ -0.11
VCAN-211ENST00000513984 KIAA1324Q6UXG2 1013 aaKnown RBP14.39□□□□□ -0.11
VCAN-211ENST00000513984 DNAJC14Q6Y2X3 702 aaPredicted RBP14.39□□□□□ -0.11
VCAN-211ENST00000513984 LPCAT2Q7L5N7 544 aa14.39□□□□□ -0.11
VCAN-211ENST00000513984 FAM124AQ86V42 546 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms