RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 CACNA1CQ13936 2221 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 A0A1W2PPV9 198 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 GABRR3A8MPY1 467 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 F8W8V4 182 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 APOC4-APOC2K7ER74 178 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 MAN1A2O60476 641 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 PHF2O75151 1096 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 VPS26AO75436 327 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 SUN1O94901 812 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 APOC2P02655 101 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 PTGER1P34995 402 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 PTGS2P35354 604 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 ST13P50502 369 aaKnown RBP10.33□□□□□ -0.76
DDX41-216ENST00000513562 YBX1P67809 324 aaKnown RBP10.33□□□□□ -0.76
DDX41-216ENST00000513562 LTBQ06643 244 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 MYBPHQ13203 477 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 POU6F1Q14863 301 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 CEBPEQ15744 281 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 HKDC1Q2TB90 917 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 KCTD11Q693B1 232 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 TMEM211Q6ICI0 200 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 SLC25A25Q6KCM7 469 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 CLEC17AQ6ZS10 378 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 LANCL3Q6ZV70 420 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 BBS12Q6ZW61 710 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 CD163Q86VB7 1156 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 RAB42Q8N4Z0 105 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 HORMAD2Q8N7B1 307 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 RAD51AP1Q96B01 352 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 LRRC45Q96CN5 670 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 SPATA13Q96N96 652 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 FERMT1Q9BQL6 677 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 DRC3Q9H069 523 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 MMP25Q9NPA2 562 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 KCNJ16Q9NPI9 418 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 C19orf25Q9UFG5 118 aaPredicted RBP10.33□□□□□ -0.76
DDX41-216ENST00000513562 RNF6Q9Y252 685 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 HRH3Q9Y5N1 445 aa10.33□□□□□ -0.76
DDX41-216ENST00000513562 A0A0A6YYC8 382 aaPredicted RBP10.32□□□□□ -0.76
DDX41-216ENST00000513562 A0A0U1RQJ8 604 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 CCDC162PA2VCL2 907 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 KRT87PA6NCN2 255 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 MROH6A6NGR9 719 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 I3L1I5 382 aaPredicted RBP10.32□□□□□ -0.76
DDX41-216ENST00000513562 CDK2AP1O14519 115 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 NME2P1O60361 137 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 SLC25A12O75746 678 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 TPOP07202 933 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 TPH1P17752 444 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 NME2P22392 152 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 MAT1AQ00266 395 aaKnown RBP10.32□□□□□ -0.76
DDX41-216ENST00000513562 OC90Q02509 493 aaPredicted RBP10.32□□□□□ -0.76
DDX41-216ENST00000513562 TCEAL1Q15170 157 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 EXT1Q16394 746 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 CCSMST1Q4G0I0 132 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 LRRC8BQ6P9F7 803 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 TTC23LQ6PF05 361 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 BIVMQ86UB2 503 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 CCDC50Q8IVM0 306 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 CDKL3Q8IVW4 592 aaPredicted RBP10.32□□□□□ -0.76
DDX41-216ENST00000513562 KATNAL2Q8IYT4 538 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 LGI4Q8N135 537 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 CPSF7Q8N684 471 aaKnown RBP10.32□□□□□ -0.76
DDX41-216ENST00000513562 SLC5A8Q8N695 610 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 M1APQ8TC57 530 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 RND1Q92730 232 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 ALPK1Q96QP1 1244 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 OR2A5Q96R48 311 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 CYTH2Q99418 400 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 PLCD4Q9BRC7 762 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 ANP32EQ9BTT0 268 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 DPH7Q9BTV6 452 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 CARD6Q9BX69 1037 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 TSSK1BQ9BXA7 367 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 HEMGNQ9BXL5 484 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 LIME1Q9H400 295 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 DNAJB12Q9NXW2 375 aaKnown RBP10.32□□□□□ -0.76
DDX41-216ENST00000513562 LRFN1Q9P244 771 aa10.32□□□□□ -0.76
DDX41-216ENST00000513562 ACANP16112 2415 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 IGKV1-8A0A0C4DH67 115 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 A0A1B0GTH9 108 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 FAM237BA0A1B0GVD1 139 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 IQCF5A8MTL0 148 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 KLK8O60259 260 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 CTAG2O75638 210 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 STK10O94804 968 aaKnown RBP10.31□□□□□ -0.76
DDX41-216ENST00000513562 C1orf105O95561 183 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 APOA4P06727 396 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 AOAHP28039 575 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 CMPK1P30085 196 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 BDKRB1P46663 353 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 MARCKSL1P49006 195 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 ADAM8P78325 824 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 FAM53BQ14153 422 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 MAPKAPK3Q16644 382 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 ANKRD37Q7Z713 158 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 PAQR7Q86WK9 346 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 RCOR2Q8IZ40 523 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 CLYBLQ8N0X4 340 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 RPRMLQ8N4K4 120 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms