RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 USP43Q70EL4 1123 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 TAOK1Q7L7X3 1001 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 FJX1Q86VR8 437 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 GALNT16Q8N428 558 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 ACBD4Q8NC06 268 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 ZNF397Q8NF99 534 aaPredicted RBP3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 IL17RDQ8NFM7 739 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 OR8K5Q8NH50 307 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 GRHL3Q8TE85 626 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 PATE1Q8WXA2 126 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 PMM1Q92871 262 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 KAT5Q92993 513 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 NT5C3BQ969T7 300 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 TMEM125Q96AQ2 219 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 ZDHHC12Q96GR4 267 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 LRGUKQ96M69 825 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 FER1L6-AS2Q96M78 137 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 TREX2Q9BQ50 279 aaPredicted RBP3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 SLX1AQ9BQ83 275 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 ALG8Q9BVK2 526 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 NLNQ9BYT8 704 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 FRMD8Q9BZ67 464 aaPredicted RBP3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 TM6SF2Q9BZW4 377 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 TKTL2Q9H0I9 626 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 LDAHQ9H6V9 325 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 WASH6PQ9NQA3 447 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 LMBRD1Q9NUN5 540 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 RLIMQ9NVW2 624 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 MPP6Q9NZW5 540 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 LUZP4Q9P127 313 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 EPHA6Q9UF33 1036 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 LNPEPQ9UIQ6 1025 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 RARRES3Q9UL19 164 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 SNX7Q9UNH6 387 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 NTNG1Q9Y2I2 539 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 RPH3AQ9Y2J0 694 aaPredicted RBP3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 ACTL7AQ9Y615 435 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 PIKFYVEQ9Y2I7 2098 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 NSD1Q96L73 2696 aaPredicted RBP3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 STAB1Q9NY15 2570 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 JMJD1CQ15652 2540 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 FN1P02751 2386 aaKnown RBP3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 CSPG4Q6UVK1 2322 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 SYNJ2BP-COX16A0A087WUM0 186 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 A6NL46 340 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 FOXO6A8MYZ6 492 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 VWC2LB2RUY7 222 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 E5RJQ4 531 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 PSMD11O00231 422 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 E2F3O00716 465 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 CETN3O15182 167 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 KLRC4O43908 158 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 SRGAP2O75044 1071 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 PEX14O75381 377 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 JRKO75564 520 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 HAUS5O94927 633 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 CLDN14O95500 239 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 JCHAINP01591 159 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 HRGP04196 525 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 F3P13726 295 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 MALP21145 153 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 FPR1P21462 350 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 PBX1P40424 430 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 GNPDA1P46926 289 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 CLCNKAP51800 687 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 MAP2K6P52564 334 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 YBEYP58557 167 aaPredicted RBP3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 PITX1P78337 314 aaPredicted RBP3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 OTUD4Q01804 1114 aaKnown RBP3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 GCNT1Q02742 428 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 LTBQ06643 244 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 NSUN2Q08J23 767 aaKnown RBP eCLIP3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 CETN1Q12798 172 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 NME3Q13232 169 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 CUL4BQ13620 913 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 ZNF267Q14586 743 aaPredicted RBP3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 DAZAP2Q15038 168 aaPredicted RBP3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 TAF5Q15542 800 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 LONRF1Q17RB8 773 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 ANO6Q4KMQ2 910 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 KHDC1Q4VXA5 237 aaKnown RBP3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 PYCR3Q53H96 274 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 DCAF10Q5QP82 559 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 CFAP58Q5T655 872 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 FAM199XQ6PEV8 388 aaPredicted RBP3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 SLC2A7Q6PXP3 512 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 IGFL2Q6UWQ7 119 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 Q6ZTC4 211 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 DPPA4Q7L190 304 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 SLC26A9Q7LBE3 791 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 PRSS42Q7Z5A4 293 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 TFAP2DQ7Z6R9 452 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 DAAM2Q86T65 1068 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 CUZD1Q86UP6 607 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 DNAAF5Q86Y56 855 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 KMT5CQ86Y97 462 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 PDSS2Q86YH6 399 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 RAB43Q86YS6 212 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 CEP97Q8IW35 865 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms