RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 COLGALT2Q8IYK4 626 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PARP8Q8N3A8 854 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 FBXL6Q8N531 539 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ASCC1Q8N9N2 400 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM98AQ8NCA5 519 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPPL3Q8TCT6 385 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PROKR1Q8TCW9 393 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CLEC4CQ8WTT0 213 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 KCNJ9Q92806 393 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ACSF2Q96CM8 615 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM167AQ96KS9 214 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAGEB10Q96LZ2 347 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 KCNK16Q96T55 309 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC25A23Q9BV35 468 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 FICDQ9BVA6 458 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPATC1LQ9H0A9 340 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 P2RY12Q9H244 342 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 METTL8Q9H825 291 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCDHB16Q9NRJ7 776 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 HAO2Q9NYQ3 351 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 NKIRAS2Q9NYR9 191 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF581Q9P0T4 197 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MGAT4CQ9UBM8 478 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CTNND2Q9UQB3 1225 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 FARSAQ9Y285 508 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 C2CD2Q9Y426 696 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 HRH3Q9Y5N1 445 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 UBE4BO95155 1302 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 STAB1Q9NY15 2570 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 KRTAP4-8A0A0G2JLE6 195 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 HYKKA2RU49 373 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM234BA2RU67 622 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CFLARO15519 480 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SIAH2O43255 324 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPIHO43447 177 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SERPINA3P01011 423 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 NTRK1P04629 796 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 HBQ1P09105 142 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SUPT20HL2P0C7V6 817 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MYBL1P10243 752 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PABPC1P11940 636 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 IL10P22301 178 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PRPH2P23942 346 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ACAT1P24752 427 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PTPN3P26045 913 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 HLA-DMAP28067 261 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CALCRP30988 508 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MC3RP41968 323 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PRIM2P49643 509 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 METAP2P50579 478 aaKnown RBP eCLIP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAGOHP61326 146 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 VBP1P61758 197 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARF5P84085 180 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PUDPQ08623 228 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPIGQ13427 754 aaKnown RBP eCLIP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF235Q14590 738 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CEBPEQ15744 281 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 NDUFAF6Q330K2 333 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 KLHL26Q53HC5 615 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CERCAMQ5T4B2 595 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CACHD1Q5VU97 1274 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARHGEF16Q5VV41 709 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAAH2Q6GMR7 532 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 TWF2Q6IBS0 349 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 GALNT17Q6IS24 598 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC8B1Q6J4K2 584 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 C8orf74Q6P047 294 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CNSTQ6PJW8 725 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CATSPER4Q7RTX7 472 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SATL1Q86VE3 508 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 LDLRAD3Q86YD5 345 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPPL2CQ8IUH8 684 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 THNSL1Q8IYQ7 743 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PGAM4Q8N0Y7 254 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 GJD3Q8N144 294 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF614Q8N883 585 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 AMER3Q8N944 861 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 TNIP2Q8NFZ5 429 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR4D11Q8NGI4 311 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 LRRC20Q8TCA0 184 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 HASPINQ8TF76 798 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 LARP4BQ92615 738 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MRPS31Q92665 395 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAGOHBQ96A72 148 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPP1R14BQ96C90 147 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 AHCYL2Q96HN2 611 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 BOD1Q96IK1 185 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 RADILQ96JH8 1075 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAR2Q96K12 515 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF560Q96MR9 790 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PKP2Q99959 881 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 LPIN3Q9BQK8 851 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF518BQ9C0D4 1074 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 LHX5Q9H2C1 402 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM83DQ9H4H8 585 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PRORYQ9H606 182 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PLGRKTQ9HBL7 147 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 EML4Q9HC35 981 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 XPNPEP3Q9NQH7 507 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 NANSQ9NR45 359 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms