RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 LRRC8BQ6P9F7 803 aa17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 ZNF534Q76KX8 674 aa17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 GALNTL5Q7Z4T8 443 aa17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 DPH7Q9BTV6 452 aa17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 ACAT2Q9BWD1 397 aa17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 TEKT2Q9UIF3 430 aa17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 CDC14AQ9UNH5 594 aa17.97■□□□□ 0.47
HMGCS1-206ENST00000511774 FAM221AA4D161 298 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 P2RX6O15547 441 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 NEURL1O76050 574 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 C1orf105O95561 183 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 GOT2P00505 430 aaKnown RBP17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 RPN2P04844 631 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 C8orf89P0DMQ9 161 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 KLK2P20151 261 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 EEF1DP29692 281 aaKnown RBP17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 PTGER1P34995 402 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 EMP3P54852 163 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 BTBD16Q32M84 506 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 ZNF468Q5VIY5 522 aaPredicted RBP17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 PLAG1Q6DJT9 500 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 CDKL3Q8IVW4 592 aaPredicted RBP17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 DMRTC2Q8IXT2 367 aaPredicted RBP17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 GHDCQ8N2G8 530 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 CSNK1A1LQ8N752 337 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 HMGCLL1Q8TB92 370 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 ASZ1Q8WWH4 475 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 HDAC10Q969S8 669 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 MVB12AQ96EY5 273 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 ZNF778Q96MU6 729 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 DLL4Q9NR61 685 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 IFNKQ9P0W0 207 aa17.96■□□□□ 0.47
HMGCS1-206ENST00000511774 MACROD2A1Z1Q3 448 aa17.95■□□□□ 0.46
HMGCS1-206ENST00000511774 TOXO94900 526 aa17.95■□□□□ 0.46
HMGCS1-206ENST00000511774 DARS2Q6PI48 645 aaKnown RBP17.95■□□□□ 0.46
HMGCS1-206ENST00000511774 CEP128Q6ZU80 1094 aa17.95■□□□□ 0.46
HMGCS1-206ENST00000511774 CPEB2Q7Z5Q1 589 aaKnown RBP17.95■□□□□ 0.46
HMGCS1-206ENST00000511774 LDB1Q86U70 411 aaPredicted RBP17.95■□□□□ 0.46
HMGCS1-206ENST00000511774 PAQR7Q86WK9 346 aa17.95■□□□□ 0.46
HMGCS1-206ENST00000511774 RPRMLQ8N4K4 120 aa17.95■□□□□ 0.46
HMGCS1-206ENST00000511774 ZNF354BQ96LW1 612 aa17.95■□□□□ 0.46
HMGCS1-206ENST00000511774 CYTH2Q99418 400 aa17.95■□□□□ 0.46
HMGCS1-206ENST00000511774 CARD6Q9BX69 1037 aa17.95■□□□□ 0.46
HMGCS1-206ENST00000511774 LIME1Q9H400 295 aa17.95■□□□□ 0.46
HMGCS1-206ENST00000511774 CCM2LQ9NUG4 571 aaPredicted RBP17.95■□□□□ 0.46
HMGCS1-206ENST00000511774 TTC7AQ9ULT0 858 aaPredicted RBP17.95■□□□□ 0.46
HMGCS1-206ENST00000511774 TFR2Q9UP52 801 aa17.95■□□□□ 0.46
HMGCS1-206ENST00000511774 FN1P02751 2386 aaKnown RBP17.95■□□□□ 0.46
HMGCS1-206ENST00000511774 PHF3Q92576 2039 aaKnown RBP17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 FAM90A27PA6NNH2 459 aa17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 PJA2O43164 708 aa17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 TSPAN12O95859 305 aa17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 STATHP02808 62 aa17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 AP2B1P63010 937 aa17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 FOXD4Q12950 439 aaPredicted RBP17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 AADACL2Q6P093 401 aa17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 PRSS41Q7RTY9 318 aa17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 TMEM200AQ86VY9 491 aa17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 ZNF227Q86WZ6 799 aa17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 TAB3Q8N5C8 712 aaPredicted RBP17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 CPSF7Q8N684 471 aaKnown RBP17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 OR8K1Q8NGG5 319 aa17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 RAD51AP1Q96B01 352 aa17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 OR2A5Q96R48 311 aa17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 FOXC2Q99958 501 aa17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 PLCD4Q9BRC7 762 aa17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 UTP23Q9BRU9 249 aaKnown RBP17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 RAB11FIP5Q9BXF6 653 aa17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 NHEJ1Q9H9Q4 299 aaPredicted RBP17.94■□□□□ 0.46
HMGCS1-206ENST00000511774 GABRR3A8MPY1 467 aa17.93■□□□□ 0.46
HMGCS1-206ENST00000511774 PRPF4O43172 522 aaKnown RBP eCLIP17.93■□□□□ 0.465e-9■□□□□ 8.4
HMGCS1-206ENST00000511774 MLYCDO95822 493 aa17.93■□□□□ 0.46
HMGCS1-206ENST00000511774 APOA4P06727 396 aa17.93■□□□□ 0.46
HMGCS1-206ENST00000511774 SP1P08047 785 aa17.93■□□□□ 0.46
HMGCS1-206ENST00000511774 MSX1P28360 303 aa17.93■□□□□ 0.46
HMGCS1-206ENST00000511774 NR0B1P51843 470 aaKnown RBP17.93■□□□□ 0.46
HMGCS1-206ENST00000511774 CCDC181Q5TID7 509 aa17.93■□□□□ 0.46
HMGCS1-206ENST00000511774 DRC3Q9H069 523 aa17.93■□□□□ 0.46
HMGCS1-206ENST00000511774 LRRC40Q9H9A6 602 aa17.93■□□□□ 0.46
HMGCS1-206ENST00000511774 KCNK13Q9HB14 408 aa17.93■□□□□ 0.46
HMGCS1-206ENST00000511774 MARCH4Q9P2E8 410 aaPredicted RBP17.93■□□□□ 0.46
HMGCS1-206ENST00000511774 RNF6Q9Y252 685 aa17.93■□□□□ 0.46
HMGCS1-206ENST00000511774 RPH3AQ9Y2J0 694 aaPredicted RBP17.93■□□□□ 0.46
HMGCS1-206ENST00000511774 PRRG2O14669 202 aa17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 STK10O94804 968 aaKnown RBP17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 ANXA5P08758 320 aa17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 CD46P15529 392 aa17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 HADHBP55084 474 aaKnown RBP17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 MEP1AQ16819 746 aa17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 PARP6Q2NL67 630 aa17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 ZNF425Q6IV72 752 aa17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 SUSD1Q6UWL2 747 aa17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 ANKRD37Q7Z713 158 aa17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 CD163Q86VB7 1156 aa17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 TMEM178AQ8NBL3 297 aa17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 OR52K1Q8NGK4 314 aa17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 OR9A4Q8NGU2 314 aa17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 LILRB4Q8NHJ6 448 aa17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 ZNF559Q9BR84 538 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms