RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 STYXQ8WUJ0 223 aa7.12□□□□□ -1.27
CPNE4-208ENST00000511604 LPAR1Q92633 364 aa7.12□□□□□ -1.27
CPNE4-208ENST00000511604 ZC3HAV1LQ96H79 300 aaKnown RBP7.12□□□□□ -1.27
CPNE4-208ENST00000511604 WDFY2Q96P53 400 aa7.12□□□□□ -1.27
CPNE4-208ENST00000511604 APOL2Q9BQE5 337 aa7.12□□□□□ -1.27
CPNE4-208ENST00000511604 KCNH6Q9H252 994 aa7.12□□□□□ -1.27
CPNE4-208ENST00000511604 CARS2Q9HA77 564 aaKnown RBP7.12□□□□□ -1.27
CPNE4-208ENST00000511604 PTTG3PQ9NZH4 202 aa7.12□□□□□ -1.27
CPNE4-208ENST00000511604 TMEFF2Q9UIK5 374 aaPredicted RBP7.12□□□□□ -1.27
CPNE4-208ENST00000511604 CNTN6Q9UQ52 1028 aa7.12□□□□□ -1.27
CPNE4-208ENST00000511604 ORC6Q9Y5N6 252 aa7.12□□□□□ -1.27
CPNE4-208ENST00000511604 OAS3Q9Y6K5 1087 aaKnown RBP7.12□□□□□ -1.27
CPNE4-208ENST00000511604 COL5A2P05997 1499 aaPredicted RBP7.12□□□□□ -1.27
CPNE4-208ENST00000511604 ANKRD12Q6UB98 2062 aa7.12□□□□□ -1.27
CPNE4-208ENST00000511604 SLC9B1P1A6NJY1 282 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 C2orf74A8MZ97 194 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 ORC5O43913 435 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 SLC43A1O75387 559 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 DHFRP00374 187 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 CST1P01037 141 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 APOC3P02656 99 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 CHRM5P08912 532 aaPredicted RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 CD63P08962 238 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 CTPS1P17812 591 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 PGAM1P18669 254 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 ATP5F1P24539 256 aaPredicted RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 ACADLP28330 430 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 GPX4P36969 197 aaPredicted RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 HNMTP50135 292 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 CLDN20P56880 219 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 CSNK2BP67870 215 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 RNF4P78317 190 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 ERV3-1Q14264 604 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 USP10Q14694 798 aaKnown RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 TEAD4Q15561 434 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 TBCEQ15813 527 aaPredicted RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 LGALSLQ3ZCW2 172 aaPredicted RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 SPOUT1Q5T280 376 aaKnown RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 ARHGAP17Q68EM7 881 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 CAPN13Q6MZZ7 669 aaPredicted RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 FAM131AQ6UXB0 335 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 AMIGO3Q86WK7 504 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 RNF130Q86XS8 419 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 DMRTC2Q8IXT2 367 aaPredicted RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 CENPLQ8N0S6 344 aaPredicted RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 KLHL36Q8N4N3 616 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 FAM86B1Q8N7N1 296 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 CDYL2Q8N8U2 506 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 FAM181AQ8N9Y4 354 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 IL17RCQ8NAC3 791 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 UBA3Q8TBC4 463 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 CLEC4DQ8WXI8 215 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 CGRRF1Q99675 332 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 MARVELD1Q9BSK0 173 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 RBCK1Q9BYM8 510 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 EQTNQ9NQ60 294 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 UFSP2Q9NUQ7 469 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 RBFOX1Q9NWB1 397 aaKnown RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 XPR1Q9UBH6 696 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 ABCA3Q99758 1704 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 LOC390937A0A1W2PQ73 354 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 BCLAF3A2AJT9 711 aaKnown RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 DDTLA6NHG4 134 aaPredicted RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 TARM1B6A8C7 271 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 SLC28A1O00337 649 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 UBFD1O14562 309 aaKnown RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 GNGT2O14610 69 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 CHP2O43745 196 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 PLOD3O60568 738 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 OAZ2O95190 189 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 LALBAP00709 142 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 RLN2P04090 185 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 ADRB1P08588 477 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 FGF2P09038 288 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 APEHP13798 732 aaKnown RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 TPH1P17752 444 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 HTR1EP28566 365 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 SDC4P31431 198 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 KCNQ1P51787 676 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 PGDP52209 483 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 SMSP52788 366 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 EEFSECP57772 596 aaKnown RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 POU4F1Q01851 419 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 SIM2Q14190 667 aaPredicted RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 RGS7BPQ6MZT1 257 aaPredicted RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 PIWIL4Q7Z3Z4 852 aaKnown RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 LUZP2Q86TE4 346 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 CEP97Q8IW35 865 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 CCDC116Q8IYX3 515 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 DCP1BQ8IZD4 617 aaKnown RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 PYROXD2Q8N2H3 581 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 STX19Q8N4C7 294 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 OR52K1Q8NGK4 314 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 UBE2FQ969M7 185 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 EXOSC8Q96B26 276 aaKnown RBP7.11□□□□□ -1.27
CPNE4-208ENST00000511604 TMEM175Q9BSA9 504 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 CD244Q9BZW8 370 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 BTBD1Q9H0C5 482 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 ST6GALNAC4Q9H4F1 302 aa7.11□□□□□ -1.27
CPNE4-208ENST00000511604 TMPRSS4Q9NRS4 437 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms