RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 AMZ1Q400G9 498 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 DSG4Q86SJ6 1040 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 SLC9B2Q86UD5 537 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 SFR1Q86XK3 245 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 BIRC7Q96CA5 298 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 CCNL2Q96S94 520 aaPredicted RBP6.16□□□□□ -1.42
USP53-206ENST00000510737 TCHPQ9BT92 498 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 TRIM9Q9C026 710 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 CPQQ9Y646 472 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 STON1Q9Y6Q2 735 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 ANK1P16157 1881 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 DENND4CQ5VZ89 1909 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 KNL1Q8NG31 2342 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 TLN1Q9Y490 2541 aaKnown RBP6.15□□□□□ -1.42
USP53-206ENST00000510737 TTC26A0AVF1 554 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 CBY3A6NI87 242 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 LAD1O00515 517 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 PIRO00625 290 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 CYB561D2O14569 222 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 VILLO15195 856 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 HOXC11O43248 304 aaPredicted RBP6.15□□□□□ -1.42
USP53-206ENST00000510737 OLFM2O95897 454 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 TBX6O95947 436 aaPredicted RBP6.15□□□□□ -1.42
USP53-206ENST00000510737 CSTBP04080 98 aaKnown RBP6.15□□□□□ -1.42
USP53-206ENST00000510737 CISD3P0C7P0 127 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 RNF224P0DH78 156 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 CXCL8P10145 99 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 CD27P26842 260 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 ECT2LQ008S8 904 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 FOXO1Q12778 655 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 NECTIN1Q15223 517 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 SOWAHAQ2M3V2 549 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 SFMBT2Q5VUG0 894 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 WSCD1Q658N2 575 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 JMJD6Q6NYC1 403 aaPredicted RBP6.15□□□□□ -1.42
USP53-206ENST00000510737 SLC26A9Q7LBE3 791 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 CHD1LQ86WJ1 897 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 BLIDQ8IZY5 108 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 THEM5Q8N1Q8 247 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 WDSUB1Q8N9V3 476 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 DNAAF1Q8NEP3 725 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 CCDC148Q8NFR7 591 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 OR13A1Q8NGR1 328 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 ZNF564Q8TBZ8 553 aaPredicted RBP6.15□□□□□ -1.42
USP53-206ENST00000510737 RUFY2Q8WXA3 655 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 HSPH1Q92598 858 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 ZNF501Q96CX3 271 aaPredicted RBP6.15□□□□□ -1.42
USP53-206ENST00000510737 SGF29Q96ES7 293 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 SIPA1Q96FS4 1042 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 TMEM19Q96HH6 336 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 DUX3Q96PT4 197 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 MMTAG2Q9BU76 263 aaKnown RBP6.15□□□□□ -1.42
USP53-206ENST00000510737 TWSG1Q9GZX9 223 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 CSTL1Q9H114 145 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 CHODLQ9H9P2 273 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 RPF1Q9H9Y2 349 aaKnown RBP6.15□□□□□ -1.42
USP53-206ENST00000510737 PLEKHA5Q9HAU0 1116 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 SH3GLB2Q9NR46 395 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 SPHK2Q9NRA0 654 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 C1RLQ9NZP8 487 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 LRWD1Q9UFC0 647 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 UBQLN1Q9UMX0 589 aaKnown RBP6.15□□□□□ -1.42
USP53-206ENST00000510737 SATB2Q9UPW6 733 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 VDAC3Q9Y277 283 aa6.15□□□□□ -1.42
USP53-206ENST00000510737 CELSR1Q9NYQ6 3014 aa6.15□□□□□ -1.43
USP53-206ENST00000510737 ICE1Q9Y2F5 2266 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 F8P00451 2351 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 SPTBN1Q01082 2364 aaKnown RBP6.14□□□□□ -1.43
USP53-206ENST00000510737 TMEM131Q92545 1883 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 A0A1B0GU03 582 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 ZNF840PA6NDX5 716 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 CDRT15L2A8MXV6 281 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 C16orf97H3BN30 126 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 SOCS6O14544 535 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 ATP2C2O75185 946 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 CSO75390 466 aaKnown RBP6.14□□□□□ -1.43
USP53-206ENST00000510737 RBMS1P29558 406 aaKnown RBP6.14□□□□□ -1.43
USP53-206ENST00000510737 DCTP40126 519 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 ASIC1P78348 528 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 SLC20A2Q08357 652 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 TGIF1Q15583 401 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 TIGD6Q17RP2 521 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 ACCSLQ4AC99 568 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 ESCO2Q56NI9 601 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 CBWD5Q5RIA9 395 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 SPATA1Q5VX52 437 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 CATSPER3Q86XQ3 398 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 BBS7Q8IWZ6 715 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 SVIPQ8NHG7 77 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 PRCCQ92733 491 aaPredicted RBP6.14□□□□□ -1.43
USP53-206ENST00000510737 CCDC43Q96MW1 224 aaKnown RBP6.14□□□□□ -1.43
USP53-206ENST00000510737 PKMYT1Q99640 499 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 SLC26A6Q9BXS9 759 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 CDC14AQ9UNH5 594 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 MYO18AQ92614 2054 aaKnown RBP6.14□□□□□ -1.43
USP53-206ENST00000510737 PDZD2O15018 2839 aa6.14□□□□□ -1.43
USP53-206ENST00000510737 ZNF638Q14966 1978 aaKnown RBP6.13□□□□□ -1.43
USP53-206ENST00000510737 CCDC196A0A1B0GTZ2 297 aa6.13□□□□□ -1.43
USP53-206ENST00000510737 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.13□□□□□ -1.43
USP53-206ENST00000510737 VPS37CA5D8V6 355 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms