RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 CCR3P51677 355 aa16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 WNT3P56703 355 aa16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 SLC14A1Q13336 389 aa16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 ZNF658BQ4V348 819 aaPredicted RBP16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 RAET1GQ6H3X3 334 aa16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 CES5AQ6NT32 575 aa16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 TRIM74Q86UV6 250 aa16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 TRAPPC5Q8IUR0 188 aa16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 CFAP206Q8IYR0 622 aa16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 FBXO15Q8NCQ5 510 aaPredicted RBP16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 OR5K1Q8NHB7 308 aa16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 HERVK_113Q902F9 699 aa16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 MUS81Q96NY9 551 aa16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 RBM4BQ9BQ04 359 aaKnown RBP16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 RBM4Q9BWF3 364 aaKnown RBP16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 OSBPL10Q9BXB5 764 aa16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 OR2AG1Q9H205 316 aa16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 TOR3AQ9H497 397 aa16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 SMURF2Q9HAU4 748 aa16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 SAMD4AQ9UPU9 718 aaKnown RBP16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 MAPRE3Q9UPY8 281 aa16.02■□□□□ 0.16
CLMAT3-201ENST00000510576 DENND4AQ7Z401 1863 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 SCAMP2O15127 329 aaKnown RBP16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 E2F6O75461 281 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 CCNDBP1O95273 360 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 CPSF4O95639 269 aaKnown RBP16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 ENGP17813 658 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 GPR1P46091 355 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 SLC6A11P48066 632 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 GTF2H3Q13889 308 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 HNRNPA1L2Q32P51 320 aaKnown RBP16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 ZBED5Q49AG3 693 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 TMEM259Q4ZIN3 620 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 C9orf64Q5T6V5 341 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 TTC23Q5W5X9 447 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 CAPN13Q6MZZ7 669 aaPredicted RBP16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 SPESP1Q6UW49 350 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 ZNF621Q6ZSS3 439 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 TMPRSS11BQ86T26 416 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 RBM23Q86U06 439 aaKnown RBP16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 C1orf52Q8N6N3 182 aaKnown RBP16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 ZNF555Q8NEP9 628 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 OR7G3Q8NG95 312 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 REPS1Q96D71 796 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 ING2Q9H160 280 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 DEC1Q9P2X7 70 aa16.02■□□□□ 0.15
CLMAT3-201ENST00000510576 PCM1Q15154 2024 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 LZTS3O60299 673 aaPredicted RBP16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 SCN2BO60939 215 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 C6P13671 934 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 SHMT2P34897 504 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 HPCAL1P37235 193 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 TBPL1P62380 186 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 PPP2R2BQ00005 443 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 MESP2Q0VG99 397 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 SF1Q15637 639 aaKnown RBP16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 SPIN4Q56A73 249 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 ZCCHC8Q6NZY4 707 aaKnown RBP16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 MED27Q6P2C8 311 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 ERICH5Q6P6B1 374 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 SLCO4C1Q6ZQN7 724 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 ZNF551Q7Z340 670 aaPredicted RBP16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 SYTL1Q8IYJ3 562 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 HUS1BQ8NHY5 278 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 ZNF480Q8WV37 535 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 NEIL2Q969S2 332 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 C11orf24Q96F05 449 aaPredicted RBP16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 PPP1R16AQ96I34 528 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 DUSP26Q9BV47 211 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 TMEM106CQ9BVX2 250 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 NPLQ9BXD5 320 aaPredicted RBP16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 AASDHPPTQ9NRN7 309 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 DYRK1BQ9Y463 629 aa16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 NUP214P35658 2090 aaPredicted RBP16.01■□□□□ 0.15
CLMAT3-201ENST00000510576 ALPK3Q96L96 1907 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 K7ESM1 405 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 LILRB5O75023 590 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 TRMUO75648 421 aaKnown RBP16■□□□□ 0.15
CLMAT3-201ENST00000510576 ETHE1O95571 254 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 ZNF682O95780 498 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 ANXA4P09525 319 aaPredicted RBP16■□□□□ 0.15
CLMAT3-201ENST00000510576 HLCSP50747 726 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 RAE1P78406 368 aaKnown RBP16■□□□□ 0.15
CLMAT3-201ENST00000510576 LRRC23Q53EV4 343 aaPredicted RBP16■□□□□ 0.15
CLMAT3-201ENST00000510576 ADNP2Q6IQ32 1131 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 ZZZ3Q8IYH5 903 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 CLECL1Q8IZS7 167 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 HS3ST5Q8IZT8 346 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 C8orf59Q8N0T1 100 aaPredicted RBP16■□□□□ 0.15
CLMAT3-201ENST00000510576 PJA1Q8NG27 643 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 PNPT1Q8TCS8 783 aaKnown RBP16■□□□□ 0.15
CLMAT3-201ENST00000510576 ZFYVE19Q96K21 471 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 MBOAT4Q96T53 435 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 IFT80Q9P2H3 777 aaPredicted RBP16■□□□□ 0.15
CLMAT3-201ENST00000510576 GULP1Q9UBP9 304 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 NOBOXO60393 691 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 SH3BGRLO75368 114 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 RB1P06400 928 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 LAMP1P11279 417 aa16■□□□□ 0.15
CLMAT3-201ENST00000510576 ADRB3P13945 408 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms