RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, human

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-231	ENST00000510245	SNRPD1	P62314	119 aa	Known RBP	7.2	□□□□□ -1.26
CAST-231	ENST00000510245	ACY1	Q03154	408 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	RAD51	Q06609	339 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	NCF4	Q15080	339 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	CYP2A13	Q16696	494 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	MYLK3	Q32MK0	819 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	ZACN	Q401N2	412 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	ARL6IP4	Q66PJ3	421 aa	Known RBP	7.2	□□□□□ -1.26
CAST-231	ENST00000510245	LCN10	Q6JVE6	187 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	IGFL2	Q6UWQ7	119 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	SETD3	Q86TU7	594 aa	Predicted RBP	7.2	□□□□□ -1.26
CAST-231	ENST00000510245	SLC9B2	Q86UD5	537 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	TTC39C	Q8N584	583 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	CCDC150	Q8NCX0	1101 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	ANKRD20A12P	Q8NF67	263 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	OR2AP1	Q8NGE2	309 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	NACC2	Q96BF6	587 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	DNAJC19	Q96DA6	116 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	OR2M4	Q96R27	311 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	TM6SF1	Q9BZW5	370 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	MIS12	Q9H081	205 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	TKTL2	Q9H0I9	626 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	APOBEC3G	Q9HC16	384 aa	Known RBP	7.2	□□□□□ -1.26
CAST-231	ENST00000510245	P4HTM	Q9NXG6	502 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	IL17C	Q9P0M4	197 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	ABI3	Q9P2A4	366 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	PCDHGB3	Q9Y5G1	929 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	CUBN	O60494	3623 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	CACNA1C	Q13936	2221 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	TG	P01266	2768 aa		7.2	□□□□□ -1.26
CAST-231	ENST00000510245	CHD5	Q8TDI0	1954 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	SYNJ2BP-COX16	A0A087WUM0	186 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	NKX2-6	A6NCS4	301 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	LILRA5	A6NI73	299 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	IDS	B3KWA1	339 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	SOCS6	O14544	535 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	RRP9	O43818	475 aa	Known RBP	7.19	□□□□□ -1.26
CAST-231	ENST00000510245	PRAMEF2	O60811	474 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	RHOBTB3	O94955	611 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	TRUB2	O95900	331 aa	Known RBP	7.19	□□□□□ -1.26
CAST-231	ENST00000510245	FYN	P06241	537 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	UNG	P13051	313 aa	Predicted RBP	7.19	□□□□□ -1.26
CAST-231	ENST00000510245	SLC2A4	P14672	509 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	FOLR1	P15328	257 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	IDS	P22304	550 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	CCR1	P32246	355 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	RAD23B	P54727	409 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	LOXL3	P58215	753 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	AIMP2	Q13155	320 aa	Known RBP	7.19	□□□□□ -1.26
CAST-231	ENST00000510245	KRTAP24-1	Q3LI83	254 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	RABL3	Q5HYI8	236 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245		Q5PR19	223 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	CFAP58	Q5T655	872 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	PLAG1	Q6DJT9	500 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	PNCK	Q6P2M8	343 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	FBXO38	Q6PIJ6	1188 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	DOK6	Q6PKX4	331 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	FAM198B	Q6UWH4	519 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	FAM92B	Q6ZTR7	304 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	TFAP2D	Q7Z6R9	452 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	CDC20B	Q86Y33	519 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	ADGRG5	Q8IZF4	528 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	CLYBL	Q8N0X4	340 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	EID3	Q8N140	333 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	TMEM132C	Q8N3T6	1108 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	7.19	□□□□□ -1.26
CAST-231	ENST00000510245	CATSPER1	Q8NEC5	780 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	PHF10	Q8WUB8	498 aa	Known RBP	7.19	□□□□□ -1.26
CAST-231	ENST00000510245	ISG20	Q96AZ6	181 aa	Known RBP	7.19	□□□□□ -1.26
CAST-231	ENST00000510245	TRIM62	Q9BVG3	475 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	C19orf24	Q9BVV8	132 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	FRMD8	Q9BZ67	464 aa	Predicted RBP	7.19	□□□□□ -1.26
CAST-231	ENST00000510245	CXorf36	Q9H7Y0	433 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	OBP2B	Q9NPH6	170 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	COX16	Q9P0S2	106 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	KCNE5	Q9UJ90	142 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	SHOC2	Q9UQ13	582 aa		7.19	□□□□□ -1.26
CAST-231	ENST00000510245	TRIM49B	A6NDI0	452 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	DIRC3	C9JPN6	131 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	EML2	O95834	649 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	ELFN1	P0C7U0	828 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	EBLN1	P0CF75	366 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	NR4A1	P22736	598 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	OR1E1	P30953	314 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	ACVRL1	P37023	503 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	MMP12	P39900	470 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	CXCR3	P49682	368 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	ANXA11	P50995	505 aa	Known RBP	7.18	□□□□□ -1.26
CAST-231	ENST00000510245	ARG2	P78540	354 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	ARF5	P84085	180 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	ANKRD1	Q15327	319 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	PTCHD3	Q3KNS1	767 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	CCDC38	Q502W7	563 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	C4orf46	Q504U0	113 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	ALF	Q53S48	1182 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	PLEKHS1	Q5SXH7	462 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	SYPL2	Q5VXT5	272 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	IGFL4	Q6B9Z1	124 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	IRGC	Q6NXR0	463 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	PGBD2	Q6P3X8	592 aa		7.18	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms