RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 ANGPTL4Q9BY76 406 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 NLNQ9BYT8 704 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 RTN4RQ9BZR6 473 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 UPF3AQ9H1J1 476 aaKnown RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 SLC25A18Q9H1K4 315 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 OPN3Q9H1Y3 402 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 RGCCQ9H4X1 137 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ECT2Q9H8V3 914 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 TM7SF3Q9NS93 570 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 LMBRD1Q9NUN5 540 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 P4HTMQ9NXG6 502 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 CLEC5AQ9NY25 188 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 PTTG2Q9NZH5 202 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 GRHL1Q9NZI5 618 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 MPP6Q9NZW5 540 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 DNAJB11Q9UBS4 358 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 B4GALT6Q9UBX8 382 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 SERGEFQ9UGK8 458 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ARMCX3Q9UH62 379 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 SLC24A2Q9UI40 661 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 CDH7Q9ULB5 785 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 HSF4Q9ULV5 492 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 CDC14AQ9UNH5 594 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 TDRKHQ9Y2W6 561 aaKnown RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 PLEKHM1Q9Y4G2 1056 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 PCDHB1Q9Y5F3 818 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 CSNK1G3Q9Y6M4 447 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ADGRB1O14514 1584 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 UGGT1Q9NYU2 1555 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ASXL2Q76L83 1435 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 NSD3Q9BZ95 1437 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 TRAPPC8Q9Y2L5 1435 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 NPIPB15A6NHN6 443 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 OR52A4PA6NMU1 304 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 MEI4A8MW99 385 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 F8W036 122 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 SLC33A1O00400 549 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 CES2O00748 559 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 MAN2B1O00754 1011 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 TOR1AO14656 332 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 KIAA0391O15091 583 aaKnown RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 SCAMP2O15127 329 aaKnown RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 TGFB1I1O43294 461 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 ASNA1O43681 348 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 NDUFS2O75306 463 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 BCAS1O75363 584 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 GPR32O75388 356 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 SCGB2A1O75556 95 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 CCNKO75909 580 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 AKAP3O75969 853 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 C1QL1O75973 258 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 RHOBTB1O94844 696 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 OAZ2O95190 189 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 BAG3O95817 575 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 SNAI1O95863 264 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 KLKB1P03952 638 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 SERPINA5P05154 406 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 PRKCBP05771 671 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 ITGA2BP08514 1039 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 CTXN2P0C2S0 81 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 MCF2P10911 925 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 SRCP12931 536 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 AKR1A1P14550 325 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 TNNI1P19237 187 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 MSH3P20585 1137 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 ITGALP20701 1170 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 AGAP20933 346 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 SAT1P21673 171 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 CCNOP22674 350 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 SP100P23497 879 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 PSMB6P28072 239 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 OTX2P32243 289 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 PTGER1P34995 402 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 NAA10P41227 235 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 GPD2P43304 727 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 HCAR3P49019 387 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 NDST2P52849 883 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 CEBPGP53567 150 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 RAB1AP62820 205 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 CSNK1G2P78368 415 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 HPCAP84074 193 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 GHRHRQ02643 423 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 TUBB3Q13509 450 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 FLOT2Q14254 428 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 HEPACAMQ14CZ8 416 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 SHBQ15464 509 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 RAB30Q15771 203 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 PHKG1Q16816 387 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 PRICKLE4Q2TBC4 344 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 TEX44Q53QW1 395 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 RAB41Q5JT25 222 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 EOGTQ5NDL2 527 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 C20orf194Q5TEA3 1177 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 BROXQ5VW32 411 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 KRT79Q5XKE5 535 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 RAET1GQ6H3X3 334 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 SULT1C3Q6IMI6 304 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 SPOPLQ6IQ16 392 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 ANO7Q6IWH7 933 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms