RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 CNTN4Q8IWV2 1026 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 LRRC56Q8IYG6 542 aaPredicted RBP14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 GALNT16Q8N428 558 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 FBXO36Q8NEA4 188 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 MCOLN3Q8TDD5 553 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 RERGQ96A58 199 aaPredicted RBP14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 PRAP1Q96NZ9 151 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 IP6K3Q96PC2 410 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 DPH5Q9H2P9 285 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 WDR54Q9H977 334 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 MAP10Q9P2G4 905 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 ANKMY1Q9P2S6 941 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 FBXL4Q9UKA2 621 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 SH2B3Q9UQQ2 575 aa14.12□□□□□ -0.15
UBE2D3-228ENST00000508974 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.12□□□□□ -0.153e-10■□□□□ 10.8
UBE2D3-228ENST00000508974 NBASA2RRP1 2371 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 AGPSO00116 658 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 EIF3FO00303 357 aaPredicted RBP14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 SOCS6O14544 535 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 P2RX6O15547 441 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 DPM1O60762 260 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 ALBP02768 609 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 C8GP07360 202 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 EZRP15311 586 aaKnown RBP14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 MMP11P24347 488 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 ITGA3P26006 1051 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 KLC1Q07866 573 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 C2orf54Q08AI8 447 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 PRTGQ2VWP7 1150 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 PRR30Q53SZ7 412 aaPredicted RBP14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 VWA2Q5GFL6 755 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 LRRC8EQ6NSJ5 796 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 JMJD6Q6NYC1 403 aaPredicted RBP14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 KIAA0408Q6ZU52 694 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 MIB2Q96AX9 1013 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 MMABQ96EY8 250 aaPredicted RBP14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 OR2A5Q96R48 311 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 OLFM1Q99784 485 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 CRB3Q9BUF7 120 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 SLC26A1Q9H2B4 701 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 UTP6Q9NYH9 597 aaKnown RBP14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 PSAT1Q9Y617 370 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 HS3ST3B1Q9Y662 390 aa14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 FLNBO75369 2602 aaKnown RBP14.11□□□□□ -0.15
UBE2D3-228ENST00000508974 DOCK10Q96BY6 2186 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 SCN3AQ9NY46 2000 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 A0A0A6YYC8 382 aaPredicted RBP14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 FEZF1A0PJY2 475 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 PABPN1LA6NDY0 278 aaKnown RBP14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 I3L1I5 382 aaPredicted RBP14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 TP73O15350 636 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 PIAS1O75925 651 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 CD97P48960 835 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 IL2P60568 153 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 SNRPNP63162 240 aaKnown RBP14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 ABATP80404 500 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 OCA2Q04671 838 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 NAE1Q13564 534 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 SYT16Q17RD7 645 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 STEAP4Q687X5 459 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 SLC6A19Q695T7 634 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 FAAH2Q6GMR7 532 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 FAM45BPQ6NSW5 357 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 PRMT9Q6P2P2 845 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 AGTRAPQ6RW13 159 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 PARP9Q8IXQ6 854 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 ZBED8Q8IZ13 594 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 RBMXL3Q8N7X1 1067 aaKnown RBP14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 FAM45AQ8TCE6 357 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 CPT1CQ8TCG5 803 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 STT3BQ8TCJ2 826 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 MIEF2Q96C03 454 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 PYCR2Q96C36 320 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 C8orf44Q96CB5 159 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 LRRC39Q96DD0 335 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 CCDC138Q96M89 665 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 SMAD5Q99717 465 aaKnown RBP14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 MACROD1Q9BQ69 325 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 PARVBQ9HBI1 364 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 ATP13A2Q9NQ11 1180 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 ZFATQ9P243 1243 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 TRPC4Q9UBN4 977 aa14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 ZNF282Q9UDV7 671 aaPredicted RBP14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 MRPS2Q9Y399 296 aaKnown RBP14.1□□□□□ -0.15
UBE2D3-228ENST00000508974 SNPHO15079 494 aa14.09□□□□□ -0.15
UBE2D3-228ENST00000508974 GUCA1CO95843 209 aa14.09□□□□□ -0.15
UBE2D3-228ENST00000508974 TSPAN12O95859 305 aa14.09□□□□□ -0.15
UBE2D3-228ENST00000508974 ONECUT2O95948 504 aa14.09□□□□□ -0.15
UBE2D3-228ENST00000508974 IGHEP01854 428 aa14.09□□□□□ -0.15
UBE2D3-228ENST00000508974 HIST1H2AGP0C0S8 130 aaPredicted RBP14.09□□□□□ -0.15
UBE2D3-228ENST00000508974 ZGLP1P0C6A0 271 aa14.09□□□□□ -0.15
UBE2D3-228ENST00000508974 HIST1H2ADP20671 130 aa14.09□□□□□ -0.15
UBE2D3-228ENST00000508974 FDXRP22570 491 aa14.09□□□□□ -0.15
UBE2D3-228ENST00000508974 UQCRFS1P47985 274 aa14.09□□□□□ -0.15
UBE2D3-228ENST00000508974 MAT1AQ00266 395 aaKnown RBP14.09□□□□□ -0.15
UBE2D3-228ENST00000508974 SP140Q13342 867 aa14.09□□□□□ -0.15
UBE2D3-228ENST00000508974 ZNF460Q14592 562 aa14.09□□□□□ -0.15
UBE2D3-228ENST00000508974 MYBPC3Q14896 1274 aa14.09□□□□□ -0.15
UBE2D3-228ENST00000508974 TUBB8Q3ZCM7 444 aa14.09□□□□□ -0.15
UBE2D3-228ENST00000508974 VWA5B1Q5TIE3 1220 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms