RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 NXPE4Q6UWF7 544 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 SLCO4C1Q6ZQN7 724 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 RNF44Q7L0R7 432 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 BPHLQ86WA6 291 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-210ENST00000506767 SLC22A9Q8IVM8 553 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 CCDC126Q96EE4 140 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 WDR34Q96EX3 536 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 SLC46A1Q96NT5 459 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 OR6C1Q96RD1 312 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 IQCGQ9H095 443 aaKnown RBP12.32□□□□□ -0.44
TCOF1-210ENST00000506767 EHD1Q9H4M9 534 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 PELI2Q9HAT8 420 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 FGF21Q9NSA1 209 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 COPG2Q9UBF2 871 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 PCTPQ9UKL6 214 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 HEATR5BQ9P2D3 2071 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 TRABD2BA6NFA1 517 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 E7EQ34 232 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 HAT1O14929 419 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 WFS1O76024 890 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 DXOO77932 396 aaKnown RBP12.31□□□□□ -0.44
TCOF1-210ENST00000506767 JMJD7P0C870 316 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 C1GALT1C1LP0DN25 315 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 MYL2P10916 166 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 CPA3P15088 417 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 EZRP15311 586 aaKnown RBP12.31□□□□□ -0.44
TCOF1-210ENST00000506767 EPB42P16452 691 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 CASP2P42575 452 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 CCR8P51685 355 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 RAB15P59190 212 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 DNAJB13P59910 316 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 MAGOHP61326 146 aaKnown RBP12.31□□□□□ -0.44
TCOF1-210ENST00000506767 HERVK_113P63132 956 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 GABREP78334 506 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 TUBB3Q13509 450 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 GTF2H2Q13888 395 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 MPP2Q14168 576 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 PCLAFQ15004 111 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 TBCCQ15814 346 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 UNC50Q53HI1 259 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 ZNF678Q5SXM1 525 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 ATG9BQ674R7 924 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 GTF2H2CQ6P1K8 395 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 CYB5D1Q6P9G0 228 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 GOLGA7Q7Z5G4 137 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 MCATQ8IVS2 390 aaKnown RBP12.31□□□□□ -0.44
TCOF1-210ENST00000506767 TEX9Q8N6V9 391 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 SNX31Q8N9S9 440 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 ARMC2Q8NEN0 867 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 ZNF483Q8TF39 744 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-210ENST00000506767 L3HYPDHQ96EM0 354 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 ZNF285Q96NJ3 590 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 FAM111AQ96PZ2 611 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 TMEM237Q96Q45 408 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 OR2A5Q96R48 311 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 TAAR9Q96RI9 348 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 ZFYVE21Q9BQ24 234 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 DDA1Q9BW61 102 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 ERVK-6Q9BXR3 956 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 SYNPO2LQ9H987 977 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 ZBTB26Q9HCK0 441 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 APMAPQ9HDC9 416 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 OXSMQ9NWU1 459 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 SLC39A1Q9NY26 324 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 PISDQ9UG56 409 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 MID2Q9UJV3 735 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 PLCL2Q9UPR0 1127 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 PCDHGA3Q9Y5H0 932 aa12.31□□□□□ -0.44
TCOF1-210ENST00000506767 KCNE1BA0A087WTH5 132 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 CDRT15L2A8MXV6 281 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 C9orf172C9J069 976 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 CLGNO14967 610 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 POLR1CO15160 346 aaPredicted RBP12.3□□□□□ -0.44
TCOF1-210ENST00000506767 TM9SF1O15321 606 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 LCMT2O60294 686 aaKnown RBP12.3□□□□□ -0.44
TCOF1-210ENST00000506767 SRPX2O60687 465 aaPredicted RBP12.3□□□□□ -0.44
TCOF1-210ENST00000506767 TNFSF15O95150 251 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 CTSBP07858 339 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 VARSP26640 1264 aaKnown RBP12.3□□□□□ -0.44
TCOF1-210ENST00000506767 PIK3CGP48736 1102 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 MAPK10P53779 464 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 SLC18A1P54219 525 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 REEP5Q00765 189 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 FOXM1Q08050 763 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 DEFB110Q30KQ9 67 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.3□□□□□ -0.44
TCOF1-210ENST00000506767 TTMPQ5BVD1 217 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 FRMPD2BQ6IN97 320 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 FOXR1Q6PIV2 292 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 TMPRSS11BQ86T26 416 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 LSMEM2Q8N112 164 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 OR8K5Q8NH50 307 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 OR1L3Q8NH93 324 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 USP7Q93009 1102 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 PMEPA1Q969W9 287 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 ATP6V1G3Q96LB4 118 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 NSUN5Q96P11 429 aaKnown RBP12.3□□□□□ -0.44
TCOF1-210ENST00000506767 FCRL4Q96PJ5 515 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 ZPBPQ9BS86 351 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 SPRY4Q9C004 299 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms