RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 MAN1B1Q9UKM7 699 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 A0A087WV48 116 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 TRAV34A0A0B4J273 112 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 ZFAND5O76080 213 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 BAG3O95817 575 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 FAM58BPP0C7Q3 252 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 SPP1P10451 314 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 F3P13726 295 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 LBPP18428 481 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 ADRA2CP18825 462 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 SLC6A12P48065 614 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 NAGLUP54802 743 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 MFAP3P55082 362 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 PAX9P55771 341 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 PTENP60484 403 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 OPCMLQ14982 345 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 ZNF74Q16587 644 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 SGSM1Q2NKQ1 1148 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 FAM91A1Q658Y4 838 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 DCLRE1AQ6PJP8 1040 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 GSG1LQ6UXU4 331 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 ANKRD33Q7Z3H0 272 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 GLRX5Q86SX6 157 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 AMIGO1Q86WK6 493 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 SMAP2Q8WU79 429 aaPredicted RBP3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 PIK3R3Q92569 461 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 RAD54LQ92698 747 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 ST6GALNAC6Q969X2 333 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 EXOC4Q96A65 974 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 PYCR2Q96C36 320 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 ZNF486Q96H40 463 aaPredicted RBP3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 KLHL5Q96PQ7 755 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 LPAR4Q99677 370 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 NKX3-1Q99801 234 aaPredicted RBP3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 ASCL2Q99929 193 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 SDCBP2Q9H190 292 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 PKD2L2Q9NZM6 624 aa3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 KLHL8Q9P2G9 620 aaPredicted RBP3.52□□□□□ -1.85
TOPBP1-204ENST00000505804 HTR3EA5X5Y0 456 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 C17orf105B2RV13 164 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 C2CD4DB7Z1M9 353 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 MAGEC1O60732 1142 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 CLDN1O95832 211 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 VTNP04004 478 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 ATP1B1P05026 303 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 ZFYP08048 801 aaPredicted RBP3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 PSMB4P28070 264 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 CETN2P41208 172 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 CSNK2BP67870 215 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 CACNG1Q06432 222 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 RBBP7Q16576 425 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 FAM174BQ3ZCQ3 159 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 FAM166AQ6J272 317 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 GALNTL5Q7Z4T8 443 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 RCOR2Q8IZ40 523 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 LRTM2Q8N967 370 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 CCDC63Q8NA47 563 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 C9orf43Q8TAL5 461 aaPredicted RBP3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 SEPT1Q8WYJ6 367 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 CENPTQ96BT3 561 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 SPATA17Q96L03 361 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 GDAP1L1Q96MZ0 367 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 INTS14Q96SY0 518 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 CDCA3Q99618 268 aaPredicted RBP3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 SYT15Q9BQS2 421 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 PHPT1Q9NRX4 125 aaPredicted RBP3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 PPP1R3CQ9UQK1 317 aa3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 EXOGQ9Y2C4 368 aaKnown RBP3.51□□□□□ -1.85
TOPBP1-204ENST00000505804 IGSF1Q8N6C5 1336 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 TRBV4-1A0A0J9YWV2 114 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 A0A1W2PR80 420 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 WDR46O15213 610 aaKnown RBP3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 TEX28O15482 410 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 DUS4LO95620 317 aaKnown RBP3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 VIMP08670 466 aaKnown RBP3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 PRKAR1AP10644 381 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 GLULP15104 373 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 EPORP19235 508 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 DUTP33316 252 aaKnown RBP3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 SFTPDP35247 375 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 XGP55808 180 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 ERVK11-1P61568 191 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 SULT2A1Q06520 285 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 PTPN14Q15678 1187 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 MPP7Q5T2T1 576 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 ZC2HC1BQ5TFG8 222 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 SHEQ5VZ18 495 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 CYB5D1Q6P9G0 228 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 PET117Q6UWS5 81 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 LEKR1Q6ZMV7 388 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 TMEM182Q6ZP80 229 aaPredicted RBP3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 PIGWQ7Z7B1 504 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 TIGD4Q8IY51 512 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 GATAD1Q8WUU5 269 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 DEPDC1BQ8WUY9 529 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 P2RX5Q93086 422 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 INPP5KQ9BT40 448 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 THUMPD3Q9BV44 507 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms