RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 OR4E2Q8NGC2 313 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 MAELQ96JY0 434 aaKnown RBP7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 C10orf90Q96M02 699 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 C20orf27Q9GZN8 174 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 HRASLS2Q9NWW9 162 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 ARL15Q9NXU5 204 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 ASIC5Q9NY37 505 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 TBK1Q9UHD2 729 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 E7EQ34 232 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 COPEO14579 308 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 SRPX2O60687 465 aaPredicted RBP7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 ENO1P06733 434 aaKnown RBP7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 HK2P52789 917 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 RPS15AP62244 130 aaKnown RBP7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 SNRPNP63162 240 aaKnown RBP7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 GTF2H2Q13888 395 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 HES3Q5TGS1 186 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 GTF2H2CQ6P1K8 395 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 ERMP1Q7Z2K6 904 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 SNRNP27Q8WVK2 155 aaKnown RBP7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 FAM136AQ96C01 138 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 SMC6Q96SB8 1091 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 MAP3K3Q99759 626 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 XKR8Q9H6D3 395 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 ABCF3Q9NUQ8 709 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 CUEDC1Q9NWM3 386 aaPredicted RBP7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 SNX7Q9UNH6 387 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 PCDHGA6Q9Y5G7 932 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 AKAP13Q12802 2813 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 SPENQ96T58 3664 aaKnown RBP7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 CCDC187A0A096LP49 1063 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 C4orf51C9J302 202 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 HAT1O14929 419 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 NVLO15381 856 aaKnown RBP7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 MED26O95402 600 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 BCL6P41182 706 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 C16orf46Q6P387 395 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 C10orf107Q8IVU9 208 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 SRRM1Q8IYB3 904 aaKnown RBP7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 C4orf33Q8N1A6 199 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 FBXO39Q8N4B4 442 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 RAB42Q8N4Z0 105 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.93□□□□□ -1.143e-8■■■■■ 39.1
CDC42SE2-208ENST00000505065 TRIM54Q9BYV2 358 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 TGIF2Q9GZN2 237 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 MOSPD1Q9UJG1 213 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 SPAARA0A1B0GVQ0 90 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 SRRM3A6NNA2 597 aaPredicted RBP7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 IFI6P09912 130 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 HSD3B1P14060 373 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 CPA3P15088 417 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 HSD3B2P26439 372 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 SERPINB4P48594 390 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 ERVPABLB-1P60509 514 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 CRTC2Q53ET0 693 aaPredicted RBP7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 GARNL3Q5VVW2 1013 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 UBE3DQ7Z6J8 389 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 DOLKQ9UPQ8 538 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 LRRC14BA6NHZ5 514 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 C9orf172C9J069 976 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 NRP2O60462 931 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 CLEC3AO75596 197 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 ESRRBO95718 433 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 MAP4P27816 1152 aaKnown RBP7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 CMPK1P30085 196 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 RAB15P59190 212 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 MAGOHP61326 146 aaKnown RBP7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 RCN2Q14257 317 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 FIGLAQ6QHK4 219 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 PTGR2Q8N8N7 351 aaPredicted RBP7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 PPM1MQ96MI6 270 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 EFCAB11Q9BUY7 163 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 GATA5Q9BWX5 397 aaPredicted RBP7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 LNPEPQ9UIQ6 1025 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 SLC22A7Q9Y694 548 aa7.93□□□□□ -1.14
CDC42SE2-208ENST00000505065 TMEM120BA0PK00 339 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 KIF1CO43896 1103 aaKnown RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 LCMT2O60294 686 aaKnown RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 MLYCDO95822 493 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 FOLR1P15328 257 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 EEF1DP29692 281 aaKnown RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 HNF4AP41235 474 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 SH3BP2P78314 561 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 TBL3Q12788 808 aaKnown RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 LCP2Q13094 533 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 PRKG2Q13237 762 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 MRM1Q6IN84 353 aaKnown RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 LETMD1Q6P1Q0 360 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 COX15Q7KZN9 410 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 CLNKQ7Z7G1 428 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 SYVN1Q86TM6 617 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 TRIM48Q8IWZ4 208 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 PPFIBP2Q8ND30 876 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 C12orf65Q9H3J6 166 aaKnown RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 ATXN7L1Q9ULK2 861 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 SLC22A14Q9Y267 594 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 VSTM2BA6NLU5 285 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 POLR2CP19387 275 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 CCR8P51685 355 aa7.92□□□□□ -1.14
CDC42SE2-208ENST00000505065 CLCQ05315 142 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms