RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 NFKBIZQ9BYH8 718 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 C11orf16Q9NQ32 467 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 OSER1Q9NX31 292 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 CLEC2DQ9UHP7 191 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 CENPBD1B2RD01 187 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 NT5C1B-RDH14C9J2C7 533 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 H3BUI4 141 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 OR7A17O14581 309 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 RGS13O14921 159 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 SLC16A6O15403 523 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 IRAK2O43187 625 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 GBAP04062 536 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 FABP3P05413 133 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 IGFBP1P08833 259 aaPredicted RBP7.4□□□□□ -1.23
NEDD9-208ENST00000504387 ATXN1LP0C7T5 689 aaKnown RBP7.4□□□□□ -1.23
NEDD9-208ENST00000504387 HCAR3P49019 387 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 RGS6P49758 472 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 UGT2B15P54855 530 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 USP39Q53GS9 565 aaKnown RBP7.4□□□□□ -1.23
NEDD9-208ENST00000504387 IRAK1BP1Q5VVH5 260 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 FAAH2Q6GMR7 532 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 TIGD7Q6NT04 549 aaPredicted RBP7.4□□□□□ -1.23
NEDD9-208ENST00000504387 PAQR6Q6TCH4 344 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 TMIGD1Q6UXZ0 262 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 BHLHA9Q7RTU4 235 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 CCDC28AQ8IWP9 274 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 OR8H3Q8N146 312 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 THEM5Q8N1Q8 247 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 STK40Q8N2I9 435 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 ZFP41Q8N8Y5 198 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 OR6C4Q8NGE1 309 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 SLC16A10Q8TF71 515 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 DIRAS2Q96HU8 199 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 OR2A14Q96R47 310 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 NIPSNAP1Q9BPW8 284 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 BOCQ9BWV1 1114 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 C1QTNF6Q9BXI9 259 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 C12orf4Q9NQ89 552 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 EVA1BQ9NVM1 165 aa7.4□□□□□ -1.23
NEDD9-208ENST00000504387 PSME4Q14997 1843 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 PLOD3O60568 738 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 BCKDHAP12694 445 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 ENGP17813 658 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 HNF4AP41235 474 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 NRIP1P48552 1158 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 KRT6CP48668 564 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 ZNF45Q02386 682 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 LRRC74AQ0VAA2 488 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 RFX4Q33E94 735 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 ZNF792Q3KQV3 632 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 LEXMQ3ZCV2 418 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 INTS6LQ5JSJ4 861 aaKnown RBP7.39□□□□□ -1.23
NEDD9-208ENST00000504387 PDZK1Q5T2W1 519 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 PTRHD1Q6GMV3 140 aaKnown RBP7.39□□□□□ -1.23
NEDD9-208ENST00000504387 FAM151BQ6UXP7 276 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 C16orf59Q7L2K0 433 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 HMGN2P46Q86SG4 172 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 MEX3DQ86XN8 651 aaKnown RBP7.39□□□□□ -1.23
NEDD9-208ENST00000504387 SLC5A8Q8N695 610 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 TOP6BLQ8N6T0 577 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 RTL3Q8N8U3 475 aaKnown RBP7.39□□□□□ -1.23
NEDD9-208ENST00000504387 OR9Q1Q8NGQ5 310 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 ENKURQ8TC29 256 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 TSGA13Q96PP4 275 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 MGLLQ99685 303 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 ADAM2Q99965 735 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 GORASP2Q9H8Y8 452 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 LRTM1Q9HBL6 345 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 NLKQ9UBE8 527 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 COMMD3Q9UBI1 195 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 RABL2AQ9UBK7 228 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-208ENST00000504387 YARS2Q9Y2Z4 477 aaKnown RBP7.39□□□□□ -1.23
NEDD9-208ENST00000504387 PCDHGA6Q9Y5G7 932 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 MROH6A6NGR9 719 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 EVPLLA8MZ36 301 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 I3L521 148 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 ARHGAP33O14559 1287 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 TPST2O60704 377 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 NOS1APO75052 506 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-208ENST00000504387 GPX5O75715 221 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 SCELO95171 688 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 TP53P04637 393 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-208ENST00000504387 YES1P07947 543 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 SERPINF2P08697 491 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 TSPAN19P0C672 248 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 PRR35P0CG20 571 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 ODC1P11926 461 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 IL7P13232 177 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 PKMP14618 531 aaKnown RBP7.39□□□□□ -1.23
NEDD9-208ENST00000504387 WARSP23381 471 aaKnown RBP7.39□□□□□ -1.23
NEDD9-208ENST00000504387 MYL9P24844 172 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 SCNN1AP37088 669 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 GNPDA1P46926 289 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 NFKB2Q00653 900 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 ELP6Q0PNE2 266 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 TAF12Q16514 161 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 GPAT3Q53EU6 434 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 UBXN11Q5T124 520 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 LIPKQ5VXJ0 399 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 SHQ1Q6PI26 577 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms