RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 MCOLN3Q8TDD5 553 aa13.04□□□□□ -0.32
HOXC6-203ENST00000504315 PDLIM5Q96HC4 596 aaKnown RBP13.04□□□□□ -0.32
HOXC6-203ENST00000504315 OLFM1Q99784 485 aa13.04□□□□□ -0.32
HOXC6-203ENST00000504315 MCMBPQ9BTE3 642 aa13.04□□□□□ -0.32
HOXC6-203ENST00000504315 TRIM31Q9BZY9 425 aa13.04□□□□□ -0.32
HOXC6-203ENST00000504315 PPANQ9NQ55 473 aaKnown RBP13.04□□□□□ -0.32
HOXC6-203ENST00000504315 CCDC177Q9NQR7 707 aaPredicted RBP13.04□□□□□ -0.32
HOXC6-203ENST00000504315 TMEM184CQ9NVA4 438 aa13.04□□□□□ -0.32
HOXC6-203ENST00000504315 CUEDC1Q9NWM3 386 aaPredicted RBP13.04□□□□□ -0.32
HOXC6-203ENST00000504315 P4HTMQ9NXG6 502 aa13.04□□□□□ -0.32
HOXC6-203ENST00000504315 GPR83Q9NYM4 423 aa13.04□□□□□ -0.32
HOXC6-203ENST00000504315 WHRNQ9P202 907 aa13.04□□□□□ -0.32
HOXC6-203ENST00000504315 G3BP2Q9UN86 482 aaKnown RBP13.04□□□□□ -0.32
HOXC6-203ENST00000504315 RUVBL1Q9Y265 456 aaKnown RBP13.04□□□□□ -0.32
HOXC6-203ENST00000504315 VWA7Q9Y334 891 aa13.04□□□□□ -0.32
HOXC6-203ENST00000504315 PEX12O00623 359 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 EIF2S1P05198 315 aaKnown RBP13.03□□□□□ -0.32
HOXC6-203ENST00000504315 CCND1P24385 295 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 CD97P48960 835 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 AP1S2P56377 157 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 IL2P60568 153 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 ETF1P62495 437 aaKnown RBP13.03□□□□□ -0.32
HOXC6-203ENST00000504315 MGAT5Q09328 741 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 PDIA2Q13087 525 aaKnown RBP13.03□□□□□ -0.32
HOXC6-203ENST00000504315 PDAP1Q13442 181 aaKnown RBP13.03□□□□□ -0.32
HOXC6-203ENST00000504315 TSTA3Q13630 321 aaPredicted RBP13.03□□□□□ -0.32
HOXC6-203ENST00000504315 VWA5B1Q5TIE3 1220 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 AGTRAPQ6RW13 159 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 LCTLQ6UWM7 567 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 MBOAT1Q6ZNC8 495 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 SLC26A11Q86WA9 606 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 ZC3HC1Q86WB0 502 aaKnown RBP13.03□□□□□ -0.32
HOXC6-203ENST00000504315 METTL27Q8N6F8 245 aaPredicted RBP13.03□□□□□ -0.32
HOXC6-203ENST00000504315 CSNK1A1LQ8N752 337 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 GPATCH11Q8N954 259 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 CLEC1AQ8NC01 280 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 FBXO36Q8NEA4 188 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 MIB2Q96AX9 1013 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 LINGO1Q96FE5 620 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 ERP44Q9BS26 406 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 SGPP1Q9BX95 441 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 ZNF304Q9HCX3 659 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 ZFATQ9P243 1243 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 C5AR2Q9P296 337 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 ZNF282Q9UDV7 671 aaPredicted RBP13.03□□□□□ -0.32
HOXC6-203ENST00000504315 SNX24Q9Y343 169 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 PSAT1Q9Y617 370 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 HS3ST3B1Q9Y662 390 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 MAU2Q9Y6X3 613 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 LRRK2Q5S007 2527 aa13.03□□□□□ -0.32
HOXC6-203ENST00000504315 POLEQ07864 2286 aa13.02□□□□□ -0.32
HOXC6-203ENST00000504315 SPTBN1Q01082 2364 aaKnown RBP13.02□□□□□ -0.32
HOXC6-203ENST00000504315 KCNE1BA0A087WTH5 132 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 H7BY64 318 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 TXNDC9O14530 226 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 HAT1O14929 419 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 EIF3HO15372 352 aaKnown RBP eCLIP13.02□□□□□ -0.33
HOXC6-203ENST00000504315 P2RX6O15547 441 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 RAD51CO43502 376 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 FOXS1O43638 330 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 DPM1O60762 260 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 ZIC2O95409 532 aaPredicted RBP13.02□□□□□ -0.33
HOXC6-203ENST00000504315 ZNF37AP17032 561 aaPredicted RBP13.02□□□□□ -0.33
HOXC6-203ENST00000504315 SLC26A3P40879 764 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 RPS15AP62244 130 aaKnown RBP13.02□□□□□ -0.33
HOXC6-203ENST00000504315 AIMP2Q13155 320 aaKnown RBP13.02□□□□□ -0.33
HOXC6-203ENST00000504315 DSG2Q14126 1118 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 FAM53BQ14153 422 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 MYBPC3Q14896 1274 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 ZXDCQ2QGD7 858 aaPredicted RBP13.02□□□□□ -0.33
HOXC6-203ENST00000504315 HKDC1Q2TB90 917 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 NADK2Q4G0N4 442 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 THEMIS2Q5TEJ8 643 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 KIRREL2Q6UWL6 708 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 SBSNQ6UWP8 590 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 IGFL3Q6UXB1 125 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 ZNF572Q7Z3I7 529 aaPredicted RBP13.02□□□□□ -0.33
HOXC6-203ENST00000504315 MAATS1Q7Z4T9 603 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 ANKMY2Q8IV38 441 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 PALM2Q8IXS6 379 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 GALNT16Q8N428 558 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 RBMXL3Q8N7X1 1067 aaKnown RBP13.02□□□□□ -0.33
HOXC6-203ENST00000504315 OR56A3Q8NH54 315 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 STT3BQ8TCJ2 826 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 ANKRD7Q92527 254 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 RERGQ96A58 199 aaPredicted RBP13.02□□□□□ -0.33
HOXC6-203ENST00000504315 THAP11Q96EK4 314 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 CABS1Q96KC9 395 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 PRAP1Q96NZ9 151 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 SARGQ9BW04 601 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 PHACTR1Q9C0D0 580 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 SEMA3GQ9NS98 782 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 CDC14AQ9UNH5 594 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 NOVA2Q9UNW9 492 aaKnown RBP13.02□□□□□ -0.33
HOXC6-203ENST00000504315 SH2B3Q9UQQ2 575 aa13.02□□□□□ -0.33
HOXC6-203ENST00000504315 PRRC2CQ9Y520 2896 aaKnown RBP13.02□□□□□ -0.33
HOXC6-203ENST00000504315 ICE1Q9Y2F5 2266 aa13.01□□□□□ -0.33
HOXC6-203ENST00000504315 A0A1W2PQ72 361 aa13.01□□□□□ -0.33
HOXC6-203ENST00000504315 A6NL46 340 aa13.01□□□□□ -0.33
HOXC6-203ENST00000504315 PRPF4O43172 522 aaKnown RBP eCLIP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms