RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 CMIPQ8IY22 773 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ZZZ3Q8IYH5 903 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 RAET1EQ8TD07 263 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ISG20Q96AZ6 181 aaKnown RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ULK4Q96C45 1275 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 GJD4Q96KN9 370 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 COMMD4Q9H0A8 199 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 CHRDQ9H2X0 955 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 GPAMQ9HCL2 828 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ASF1BQ9NVP2 202 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 DNMT3AQ9Y6K1 912 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ABCC4O15439 1325 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 TMEM131LA2VDJ0 1609 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 XKRY2A2RUG3 117 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF705FA8MVS1 300 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 AQP7O14520 342 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 GOSR2O14653 212 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF185O15231 689 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 OTCP00480 354 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 TGFAP01135 160 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 DCNP07585 359 aaKnown RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF705DP0CH99 300 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF705BP0CI00 300 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 CCNB1P14635 433 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 PFKFB1P16118 471 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF7P17097 686 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 AZGP1P25311 298 aaKnown RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 RYKP34925 604 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ID4P47928 161 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 DMWDQ09019 674 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 TFCP2Q12800 502 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 SNTB1Q13884 538 aaKnown RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 TRIP4Q15650 581 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 TBCEQ15813 527 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 SEZ6Q53EL9 994 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 CARD17Q5XLA6 110 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 BAIAP2L2Q6UXY1 529 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ARCQ7LC44 396 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 TRMT1LQ7Z2T5 733 aaKnown RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 RBM45Q8IUH3 476 aaKnown RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 BPIFB6Q8NFQ5 453 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 OR10R2Q8NGX6 335 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 LPPQ93052 612 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 INTS14Q96SY0 518 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 MID1IP1Q9NPA3 183 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 SLCO1B3Q9NPD5 702 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 XPNPEP3Q9NQH7 507 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 TMEM45AQ9NWC5 275 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 DHRS7Q9Y394 339 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 DMRT1Q9Y5R6 373 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ZMYM2Q9UBW7 1377 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 PRAMEF33A0A0G2JMD5 474 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 FAM221AA4D161 298 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 K7ERU9 68 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 CES2O00748 559 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 ACOX3O15254 700 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 PRAMEF10O60809 474 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 ERBB2P04626 1255 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 CSH1P0DML2 217 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 CSH2P0DML3 217 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 IFNGR1P15260 489 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 ADH6P28332 368 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 OTX2P32243 289 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 GNPDA1P46926 289 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 FOXO1Q12778 655 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 SQSTM1Q13501 440 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 SELPLGQ14242 412 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 FAM98BQ52LJ0 330 aaKnown RBP6.09□□□□□ -1.43
CLCN3-204ENST00000504131 C6orf52Q5T4I8 152 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF410Q86VK4 478 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 L3MBTL4Q8NA19 623 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.09□□□□□ -1.43
CLCN3-204ENST00000504131 TBC1D16Q8TBP0 767 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 ACTRT1Q8TDG2 376 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 PAQR8Q8TEZ7 354 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 CHTF18Q8WVB6 975 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 TMEM80Q96HE8 168 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 FUCA2Q9BTY2 467 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF350Q9GZX5 532 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 SLC25A18Q9H1K4 315 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 PRO1933Q9H354 126 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 MOB1AQ9H8S9 216 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 AKIRIN1Q9H9L7 192 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-204ENST00000504131 DBR1Q9UK59 544 aaKnown RBP6.09□□□□□ -1.43
CLCN3-204ENST00000504131 PLA2R1Q13018 1463 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 RECQL4O94761 1208 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 ATG12O94817 140 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 KIAA1024LP59773 190 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 AMHR2Q16671 573 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 PLA1AQ53H76 456 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 TBCELQ5QJ74 424 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 PHYHD1Q5SRE7 291 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 CAMKMTQ7Z624 323 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 COL23A1Q86Y22 540 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-204ENST00000504131 SFRP1Q8N474 314 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 LKAAEAR1Q8TD35 194 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 SLCO5A1Q9H2Y9 848 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 ITGA11Q9UKX5 1188 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 U3KQV3 271 aa6.09□□□□□ -1.43
CLCN3-204ENST00000504131 ADGRL3Q9HAR2 1447 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms