RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 BDKRB1P46663 353 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 CCDC80Q76M96 950 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 GPALPP1Q8IXQ4 340 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 KCTD7Q96MP8 289 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 GMLQ99445 158 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 IFT46Q9NQC8 304 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 C14orf105Q9NVL8 296 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 TUBA8Q9NY65 449 aaPredicted RBP16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 H0YGN5 161 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 FPR1P21462 350 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 KCNC3Q14003 757 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 PTCHD3Q3KNS1 767 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 C2orf27AQ580R0 203 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 ZNF678Q5SXM1 525 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 PPP2R2DQ66LE6 453 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 PRSS58Q8IYP2 241 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 COMMD3Q9UBI1 195 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 NFS1Q9Y697 457 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 TOR1BO14657 336 aa16.08■□□□□ 0.17
PCDHA1-203ENST00000504120 GATBO75879 557 aaKnown RBP16.08■□□□□ 0.17
PCDHA1-203ENST00000504120 S100A1P23297 94 aa16.08■□□□□ 0.17
PCDHA1-203ENST00000504120 NRG3P56975 720 aa16.08■□□□□ 0.17
PCDHA1-203ENST00000504120 MADCAM1Q13477 382 aa16.08■□□□□ 0.17
PCDHA1-203ENST00000504120 OLIG2Q13516 323 aa16.08■□□□□ 0.17
PCDHA1-203ENST00000504120 ZNF630Q2M218 657 aaPredicted RBP16.08■□□□□ 0.17
PCDHA1-203ENST00000504120 CMTM8Q8IZV2 173 aa16.08■□□□□ 0.17
PCDHA1-203ENST00000504120 TFGQ92734 400 aaPredicted RBP16.08■□□□□ 0.17
PCDHA1-203ENST00000504120 ZNF641Q96N77 438 aaPredicted RBP16.08■□□□□ 0.17
PCDHA1-203ENST00000504120 PSKH2Q96QS6 385 aa16.08■□□□□ 0.17
PCDHA1-203ENST00000504120 PKP2Q99959 881 aa16.08■□□□□ 0.17
PCDHA1-203ENST00000504120 CD244Q9BZW8 370 aa16.08■□□□□ 0.17
PCDHA1-203ENST00000504120 WRBO00258 174 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 BCHEP06276 602 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 ITGA3P26006 1051 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 AGTRAPQ6RW13 159 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 NANOGNBQ7Z5D8 188 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 AVL9Q8NBF6 648 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 LMO3Q8TAP4 145 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 SIPA1Q96FS4 1042 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 YIPF4Q9BSR8 244 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 UTS2RQ9UKP6 389 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 FKBP7Q9Y680 259 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 LAMB4A4D0S4 1761 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 ACOX3O15254 700 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 SMSP52788 366 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 TGFBIQ15582 683 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 ALKBH2Q6NS38 261 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 KIAA1161Q6NSJ0 714 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 CLDN19Q8N6F1 224 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 AMBNQ9NP70 447 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 PRAMEF33A0A0G2JMD5 474 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 BHMG1C9JSJ3 638 aaPredicted RBP16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 AKAP8O43823 692 aaKnown RBP16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 PRAMEF10O60809 474 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 CREG1O75629 220 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 CNTN5O94779 1100 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 OPN1SWP03999 348 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 ZNF8P17098 575 aaPredicted RBP16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 KLHL6Q8WZ60 621 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 CST11Q9H112 138 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 INSL5Q9Y5Q6 135 aa16.08■□□□□ 0.16
PCDHA1-203ENST00000504120 COQ9O75208 318 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 CHRM5P08912 532 aaPredicted RBP16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 GDI1P31150 447 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 TSPAN5P62079 268 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 CARTPTQ16568 116 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 OR2L5Q8NG80 312 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 BIRC7Q96CA5 298 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 MOV10Q9HCE1 1003 aaKnown RBP16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 CLCA3PQ9Y6N3 262 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 LOC100130705A0A1B0GUX0 176 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 RCBTB2O95199 551 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 CYB5AP00167 134 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 GJA1P17302 382 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 ACSL1P33121 698 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 ADAM8P78325 824 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 RASGEF1BQ0VAM2 473 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 GPR68Q15743 365 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 NADK2Q4G0N4 442 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 PRPF38BQ5VTL8 546 aaKnown RBP16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 LINGO2Q7L985 606 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 C7orf43Q8WVR3 580 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 SLC5A11Q8WWX8 675 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 JSRP1Q96MG2 331 aaPredicted RBP16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 GFM1Q96RP9 751 aaKnown RBP16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 ITPAQ9BY32 194 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 TBL1XR1Q9BZK7 514 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 UCK2Q9BZX2 261 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 RETREG1Q9H6L5 497 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 TPT1P8Q9HAU6 139 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 SIRPGQ9P1W8 387 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 CICQ96RK0 1608 aaPredicted RBP16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 CCDC85CA6NKD9 419 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 TBX1O43435 398 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 TRIM3O75382 744 aaPredicted RBP16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 TNFP01375 233 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 GDF5P43026 501 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 TAS2R50P59544 299 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 TMIGD1Q6UXZ0 262 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 GALNT15Q8N3T1 639 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms