RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 ERP44Q9BS26 406 aa4.6□□□□□ -1.67
SSR3-209ENST00000498205 UBA5Q9GZZ9 404 aa4.6□□□□□ -1.67
SSR3-209ENST00000498205 TMX4Q9H1E5 349 aaPredicted RBP4.6□□□□□ -1.67
SSR3-209ENST00000498205 MMP28Q9H239 520 aa4.6□□□□□ -1.67
SSR3-209ENST00000498205 LRRC19Q9H756 370 aa4.6□□□□□ -1.67
SSR3-209ENST00000498205 DNAJC18Q9H819 358 aa4.6□□□□□ -1.67
SSR3-209ENST00000498205 VCPKMTQ9H867 229 aa4.6□□□□□ -1.67
SSR3-209ENST00000498205 ZDHHC18Q9NUE0 388 aa4.6□□□□□ -1.67
SSR3-209ENST00000498205 GCNT4Q9P109 453 aa4.6□□□□□ -1.67
SSR3-209ENST00000498205 LARSQ9P2J5 1176 aaKnown RBP4.6□□□□□ -1.67
SSR3-209ENST00000498205 AASSQ9UDR5 926 aa4.6□□□□□ -1.67
SSR3-209ENST00000498205 CNOT8Q9UFF9 292 aaKnown RBP4.6□□□□□ -1.67
SSR3-209ENST00000498205 GTF3C4Q9UKN8 822 aa4.6□□□□□ -1.67
SSR3-209ENST00000498205 DLGAP4Q9Y2H0 992 aa4.6□□□□□ -1.67
SSR3-209ENST00000498205 KLHL20Q9Y2M5 609 aa4.6□□□□□ -1.67
SSR3-209ENST00000498205 MRPL11Q9Y3B7 192 aaKnown RBP4.6□□□□□ -1.67
SSR3-209ENST00000498205 LYVE1Q9Y5Y7 322 aa4.6□□□□□ -1.67
SSR3-209ENST00000498205 PSAT1Q9Y617 370 aa4.6□□□□□ -1.67
SSR3-209ENST00000498205 SLX4Q8IY92 1834 aa4.6□□□□□ -1.67
SSR3-209ENST00000498205 GMNCA6NCL1 334 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 SMCHD1A6NHR9 2005 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 LIPT2A6NK58 231 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 ANKRD66B4E2M5 251 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 FAM86B1E9PN63 330 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 F5H6K3 240 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 H0YCG3 227 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 O00370 1275 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 CHUKO15111 745 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 ZNHIT1O43257 154 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 FGF17O60258 216 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 DKC1O60832 514 aaKnown RBP eCLIP4.59□□□□□ -1.67
SSR3-209ENST00000498205 RTN2O75298 545 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 RNASEH2AO75792 299 aaKnown RBP4.59□□□□□ -1.67
SSR3-209ENST00000498205 DDNO94850 711 aaPredicted RBP4.59□□□□□ -1.67
SSR3-209ENST00000498205 SLITRK3O94933 977 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 NDUFB10O96000 172 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 CRYAAP02489 173 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 KRT14P02533 472 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 FAM86B2P0C5J1 330 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 FAM106CPP0CH98 169 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 MYBL1P10243 752 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 EEF2P13639 858 aaKnown RBP4.59□□□□□ -1.67
SSR3-209ENST00000498205 HLA-DOBP13765 273 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 CD53P19397 219 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 ATP5DP30049 168 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 HOXA13P31271 388 aaPredicted RBP4.59□□□□□ -1.67
SSR3-209ENST00000498205 MYH11P35749 1972 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 RGS2P41220 211 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 APOBEC1P41238 236 aaKnown RBP4.59□□□□□ -1.67
SSR3-209ENST00000498205 SLC1A1P43005 524 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 HSD17B4P51659 736 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 PRELPP51888 382 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 FUT6P51993 359 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 STAT2P52630 851 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 GALCP54803 685 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 MLLT10P55197 1068 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 PHEXP78562 749 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 GTF2BQ00403 316 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 GCNT1Q02742 428 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 KLRC3Q07444 240 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 ACTN3Q08043 901 aaPredicted RBP4.59□□□□□ -1.67
SSR3-209ENST00000498205 XRCC4Q13426 336 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 CRYMQ14894 314 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 UAP1Q16222 522 aaPredicted RBP4.59□□□□□ -1.67
SSR3-209ENST00000498205 UBE2SQ16763 222 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 EPC2Q52LR7 807 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 GKAP1Q5VSY0 366 aaPredicted RBP4.59□□□□□ -1.67
SSR3-209ENST00000498205 HIST2H2BCQ6DN03 193 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 HIST2H2BDQ6DRA6 164 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 TRMT1LQ7Z2T5 733 aaKnown RBP4.59□□□□□ -1.67
SSR3-209ENST00000498205 PXKQ7Z7A4 578 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 NFE4Q86UQ8 179 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 DCUN1D3Q8IWE4 304 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 ODF3L1Q8IXM7 274 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 FAM71AQ8IYT1 594 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 RIBC1Q8N443 379 aaPredicted RBP4.59□□□□□ -1.67
SSR3-209ENST00000498205 OTUD6BQ8N6M0 293 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 BBOF1Q8ND07 529 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 ZNF473Q8WTR7 871 aaKnown RBP4.59□□□□□ -1.67
SSR3-209ENST00000498205 SHC3Q92529 594 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 C1QTNF1Q9BXJ1 281 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 SEBOXQ9HB31 216 aaPredicted RBP4.59□□□□□ -1.67
SSR3-209ENST00000498205 VAT1LQ9HCJ6 419 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 AGPAT3Q9NRZ7 376 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 HCFC1R1Q9NWW0 138 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 COPG2Q9UBF2 871 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 MTRF1LQ9UGC7 380 aaKnown RBP4.59□□□□□ -1.67
SSR3-209ENST00000498205 FETUBQ9UGM5 382 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 POLG2Q9UHN1 485 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 MTUS1Q9ULD2 1270 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 RPL26L1Q9UNX3 145 aaKnown RBP4.59□□□□□ -1.67
SSR3-209ENST00000498205 TFR2Q9UP52 801 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 ADAM18Q9Y3Q7 739 aa4.59□□□□□ -1.67
SSR3-209ENST00000498205 NFASCO94856 1347 aa4.58□□□□□ -1.68
SSR3-209ENST00000498205 CFAP73A6NFT4 308 aa4.58□□□□□ -1.68
SSR3-209ENST00000498205 EIF4E1BA6NMX2 242 aaKnown RBP4.58□□□□□ -1.68
SSR3-209ENST00000498205 FAM90A26D6RGX4 464 aa4.58□□□□□ -1.68
SSR3-209ENST00000498205 BUB1O43683 1085 aa4.58□□□□□ -1.68
SSR3-209ENST00000498205 GPC4O75487 556 aa4.58□□□□□ -1.68
SSR3-209ENST00000498205 GCNT3O95395 438 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms