RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CLEC4FQ8N1N0 589 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 SVOPLQ8N434 492 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 OR8J2Q8NGG1 315 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 CDC26Q8NHZ8 85 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 ZNF480Q8WV37 535 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 NEIL2Q969S2 332 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 REPS1Q96D71 796 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 C11orf24Q96F05 449 aaPredicted RBP12.61□□□□□ -0.39
GARNL3-220ENST00000496711 ZNF514Q96K75 400 aaPredicted RBP12.61□□□□□ -0.39
GARNL3-220ENST00000496711 PANX1Q96RD7 426 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 TRIM64A6NGJ6 449 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 TRIM64CA6NLI5 447 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 MAGEB17A8MXT2 336 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 G3V2T6 193 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 SCAMP2O15127 329 aaKnown RBP12.61□□□□□ -0.39
GARNL3-220ENST00000496711 MMP20O60882 483 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 EPN2O95208 641 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 ETHE1O95571 254 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 THRBP10828 461 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 MYCLP1P12525 358 aaPredicted RBP12.61□□□□□ -0.39
GARNL3-220ENST00000496711 ASMTP46597 345 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 CDH15P55291 814 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 WNT3P56703 355 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 SLC14A1Q13336 389 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.61□□□□□ -0.39
GARNL3-220ENST00000496711 TMEM52BQ4KMG9 183 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 ADNP2Q6IQ32 1131 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 MED27Q6P2C8 311 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 B3GNT6Q6ZMB0 384 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 SLCO4C1Q6ZQN7 724 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 SYTL1Q8IYJ3 562 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 ZCCHC7Q8N3Z6 543 aaKnown RBP12.61□□□□□ -0.39
GARNL3-220ENST00000496711 C1orf52Q8N6N3 182 aaKnown RBP12.61□□□□□ -0.39
GARNL3-220ENST00000496711 TERB1Q8NA31 727 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 OR7G3Q8NG95 312 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 HUS1BQ8NHY5 278 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 NETO1Q8TDF5 533 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 LINC00615Q96LM1 132 aaPredicted RBP12.61□□□□□ -0.39
GARNL3-220ENST00000496711 RDH12Q96NR8 316 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 FAM129BQ96TA1 746 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 TMEM245Q9H330 911 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 SOX17Q9H6I2 414 aaPredicted RBP12.61□□□□□ -0.39
GARNL3-220ENST00000496711 SFXN1Q9H9B4 322 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 TRIM39Q9HCM9 518 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 PRM3Q9NNZ6 103 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 ATXN10Q9UBB4 475 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 MAPRE3Q9UPY8 281 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 DYRK1BQ9Y463 629 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 NUP214P35658 2090 aaPredicted RBP12.61□□□□□ -0.39
GARNL3-220ENST00000496711 C1QTNF3-AMACRE9PGA6 284 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 GNGT2O14610 69 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 SCN2BO60939 215 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 PAPLNO95428 1278 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 CA3P07451 260 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 FSHRP23945 695 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 RPL10P27635 214 aaKnown RBP12.6□□□□□ -0.39
GARNL3-220ENST00000496711 HPCAL1P37235 193 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 RAE1P78406 368 aaKnown RBP12.6□□□□□ -0.39
GARNL3-220ENST00000496711 LSAMPQ13449 338 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 PDGFRLQ15198 375 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 NAIF1Q69YI7 327 aaPredicted RBP12.6□□□□□ -0.39
GARNL3-220ENST00000496711 XKR5Q6UX68 686 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 ERN2Q76MJ5 926 aaKnown RBP12.6□□□□□ -0.39
GARNL3-220ENST00000496711 TRMT11Q7Z4G4 463 aaKnown RBP12.6□□□□□ -0.39
GARNL3-220ENST00000496711 DSG4Q86SJ6 1040 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 ADHFE1Q8IWW8 467 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 CXorf40AQ8TE69 158 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 FGF13Q92913 245 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 WDR34Q96EX3 536 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 UTS2RQ9UKP6 389 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 SAMD4AQ9UPU9 718 aaKnown RBP12.6□□□□□ -0.39
GARNL3-220ENST00000496711 CEPT1Q9Y6K0 416 aa12.6□□□□□ -0.39
GARNL3-220ENST00000496711 C17orf113A0A1B0GUU1 675 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 CLIC1O00299 241 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 VEGFDO43915 354 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 CCNDBP1O95273 360 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 ENGP17813 658 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 TIA1P31483 386 aaKnown RBP eCLIP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 EPS8Q12929 822 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 STARD3Q14849 445 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 C10orf62Q5T681 223 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 CES5AQ6NT32 575 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 ERICH5Q6P6B1 374 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 CRTC3Q6UUV7 619 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 GET4Q7L5D6 327 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 ZNF551Q7Z340 670 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-220ENST00000496711 GPR155Q7Z3F1 870 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 CAMKMTQ7Z624 323 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 ZNF547Q8IVP9 402 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 SFTPA1Q8IWL2 248 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 ALDH16A1Q8IZ83 802 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 EID3Q8N140 333 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 OR9A1PQ8NGU1 263 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 SUSD6Q92537 303 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 PYURFQ96I23 114 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 SAMD11Q96NU1 681 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 EFCAB11Q9BUY7 163 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 DUSP26Q9BV47 211 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 SGPP1Q9BX95 441 aa12.59□□□□□ -0.39
GARNL3-220ENST00000496711 ITM2CQ9NQX7 267 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms