RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 SLC6A20Q9NP91 592 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 CUTCQ9NTM9 273 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 TMEM184CQ9NVA4 438 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 DHCR7Q9UBM7 475 aaKnown RBP15.68■□□□□ 0.1
SF3A1-209ENST00000496189 RALYQ9UKM9 306 aaKnown RBP15.68■□□□□ 0.1
SF3A1-209ENST00000496189 ACOT9Q9Y305 439 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 CDC14CA4D256 554 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 DSCR3O14972 297 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 PRPF4O43172 522 aaKnown RBP eCLIP15.67■□□□□ 0.1
SF3A1-209ENST00000496189 HCRTR1O43613 425 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 CTSVO60911 334 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 SNRPAP09012 282 aaKnown RBP15.67■□□□□ 0.1
SF3A1-209ENST00000496189 ATXN8OSP0DMR3 200 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 F8A1P23610 371 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 PGGT1BP53609 377 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 RPS15AP62244 130 aaKnown RBP15.67■□□□□ 0.1
SF3A1-209ENST00000496189 CDKL1Q00532 357 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 RELAQ04206 551 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 BMPR2Q13873 1038 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 MUM1Q2TAK8 710 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 MLIPQ5VWP3 458 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 ZNF517Q6ZMY9 492 aaPredicted RBP15.67■□□□□ 0.1
SF3A1-209ENST00000496189 MBOAT1Q6ZNC8 495 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 PAQR7Q86WK9 346 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 APOBEC4Q8WW27 367 aaKnown RBP15.67■□□□□ 0.1
SF3A1-209ENST00000496189 SLC39A7Q92504 469 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 TTC9Q92623 222 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 EXTL1Q92935 676 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 MTBPQ96DY7 904 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 CABS1Q96KC9 395 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 NMRAL1Q9HBL8 299 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 DYRK1BQ9Y463 629 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 OARD1Q9Y530 152 aa15.67■□□□□ 0.1
SF3A1-209ENST00000496189 IQANK1A0A1B0GTG1 560 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 H7BY64 318 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 CDC7O00311 574 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 TERTO14746 1132 aaKnown RBP15.66■□□□□ 0.1
SF3A1-209ENST00000496189 NCF4Q15080 339 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 TBR1Q16650 682 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 FAM83EQ2M2I3 478 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 DEFB109BQ30KR1 87 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 NKAIN1Q4KMZ8 207 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 FRMPD2BQ6IN97 320 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 ADGRD1Q6QNK2 874 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 SBSNQ6UWP8 590 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 CMC1Q7Z7K0 106 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 RAB43Q86YS6 212 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 SPNS2Q8IVW8 549 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 LRRC56Q8IYG6 542 aaPredicted RBP15.66■□□□□ 0.1
SF3A1-209ENST00000496189 TCAIMQ8N3R3 496 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 CSNK1A1LQ8N752 337 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 AENQ8WTP8 325 aaKnown RBP15.66■□□□□ 0.1
SF3A1-209ENST00000496189 DCAKDQ8WVC6 231 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 ANKRD49Q8WVL7 239 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 THAP4Q8WY91 577 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 CAVIN3Q969G5 261 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 THAP11Q96EK4 314 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 UBXN10Q96LJ8 280 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 PRAP1Q96NZ9 151 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 GBP5Q96PP8 586 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 SGPP1Q9BX95 441 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 CNOT10Q9H9A5 744 aaKnown RBP15.66■□□□□ 0.1
SF3A1-209ENST00000496189 AKIRIN1Q9H9L7 192 aaPredicted RBP15.66■□□□□ 0.1
SF3A1-209ENST00000496189 SNX15Q9NRS6 342 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 STARD5Q9NSY2 213 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 PSMC3IPQ9P2W1 217 aaPredicted RBP15.66■□□□□ 0.1
SF3A1-209ENST00000496189 RAB21Q9UL25 225 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 TCFL5Q9UL49 500 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 CDC14AQ9UNH5 594 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 MAN2B2Q9Y2E5 1009 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 CHD6Q8TD26 2715 aa15.66■□□□□ 0.1
SF3A1-209ENST00000496189 NBEAQ8NFP9 2946 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 PCM1Q15154 2024 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 A0A096LPK6 155 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 CCDC189A1A4V9 331 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 HYKKA2RU49 373 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 FITM1A5D6W6 292 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 H0YGG7 62 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 H3BMH7 237 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 HAT1O14929 419 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 WISP3O95389 354 aaPredicted RBP15.65■□□□□ 0.1
SF3A1-209ENST00000496189 C2P06681 752 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 LTA4HP09960 611 aaKnown RBP15.65■□□□□ 0.1
SF3A1-209ENST00000496189 SLC35E2BP0CK96 405 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 HSD17B3P37058 310 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 FOLR3P41439 243 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 ARF3P61204 181 aaPredicted RBP15.65■□□□□ 0.1
SF3A1-209ENST00000496189 CSHL1Q14406 222 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 TSNQ15631 228 aaKnown RBP15.65■□□□□ 0.1
SF3A1-209ENST00000496189 NDUFA9Q16795 377 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 UGT8Q16880 541 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 ZNF425Q6IV72 752 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 PRMT9Q6P2P2 845 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 KLC3Q6P597 504 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 FAM198BQ6UWH4 519 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 OR56A3Q8NH54 315 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 PYCR2Q96C36 320 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 TSNARE1Q96NA8 513 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 ZNF285Q96NJ3 590 aa15.65■□□□□ 0.1
SF3A1-209ENST00000496189 CUEDC1Q9NWM3 386 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms