RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 CCDC97Q96F63 343 aaPredicted RBP9.55□□□□□ -0.88
SURF1-204ENST00000495952 IGSF21Q96ID5 467 aa9.55□□□□□ -0.88
SURF1-204ENST00000495952 HRASLS5Q96KN8 279 aa9.55□□□□□ -0.88
SURF1-204ENST00000495952 TSSK3Q96PN8 268 aa9.55□□□□□ -0.88
SURF1-204ENST00000495952 PANX1Q96RD7 426 aa9.55□□□□□ -0.88
SURF1-204ENST00000495952 CLSTN3Q9BQT9 956 aa9.55□□□□□ -0.88
SURF1-204ENST00000495952 NEURL2Q9BR09 285 aa9.55□□□□□ -0.88
SURF1-204ENST00000495952 INPP5KQ9BT40 448 aa9.55□□□□□ -0.88
SURF1-204ENST00000495952 TM6SF2Q9BZW4 377 aa9.55□□□□□ -0.88
SURF1-204ENST00000495952 REXO4Q9GZR2 422 aaKnown RBP9.55□□□□□ -0.88
SURF1-204ENST00000495952 CCDC90BQ9GZT6 254 aa9.55□□□□□ -0.88
SURF1-204ENST00000495952 RIBC2Q9H4K1 309 aa9.55□□□□□ -0.88
SURF1-204ENST00000495952 SP140LQ9H930 580 aa9.55□□□□□ -0.88
SURF1-204ENST00000495952 SPATA6Q9NWH7 488 aaPredicted RBP9.55□□□□□ -0.88
SURF1-204ENST00000495952 ADPRHL2Q9NX46 363 aa9.55□□□□□ -0.88
SURF1-204ENST00000495952 GPRC5BQ9NZH0 403 aa9.55□□□□□ -0.88
SURF1-204ENST00000495952 CCDC59Q9P031 241 aaKnown RBP9.55□□□□□ -0.88
SURF1-204ENST00000495952 ZNF282Q9UDV7 671 aaPredicted RBP9.55□□□□□ -0.88
SURF1-204ENST00000495952 ABCG2Q9UNQ0 655 aa9.55□□□□□ -0.88
SURF1-204ENST00000495952 HS3ST2Q9Y278 367 aa9.55□□□□□ -0.88
SURF1-204ENST00000495952 DENND4AQ7Z401 1863 aa9.55□□□□□ -0.88
SURF1-204ENST00000495952 ARRDC5A6NEK1 342 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 NPIPB15A6NHN6 443 aaPredicted RBP9.54□□□□□ -0.88
SURF1-204ENST00000495952 BOLA2-SMG1P6H3BVE0 249 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 SCAMP2O15127 329 aaKnown RBP9.54□□□□□ -0.88
SURF1-204ENST00000495952 FOXD2O60548 495 aaPredicted RBP9.54□□□□□ -0.88
SURF1-204ENST00000495952 NADKO95544 446 aaPredicted RBP9.54□□□□□ -0.88
SURF1-204ENST00000495952 ZNF682O95780 498 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 CXCL10P02778 98 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 MT-ND2P03891 347 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 MYCLP1P12525 358 aaPredicted RBP9.54□□□□□ -0.88
SURF1-204ENST00000495952 ATP1B2P14415 290 aaPredicted RBP9.54□□□□□ -0.88
SURF1-204ENST00000495952 TGM1P22735 817 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 HOXD10P28358 340 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 CD6P30203 668 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 HOXA9P31269 272 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 TGFBR2P37173 567 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 ALDH7A1P49419 539 aaKnown RBP9.54□□□□□ -0.88
SURF1-204ENST00000495952 GATMP50440 423 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 CCR3P51677 355 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 EPHB3P54753 998 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 SLC7A9P82251 487 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 B4GALNT1Q00973 533 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 CREMQ03060 361 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.54□□□□□ -0.88
SURF1-204ENST00000495952 RBBP4Q09028 425 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 FCHO2Q0JRZ9 810 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 NPRL3Q12980 569 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 ITGADQ13349 1161 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 CAMK2GQ13555 558 aaPredicted RBP9.54□□□□□ -0.88
SURF1-204ENST00000495952 GTF2H3Q13889 308 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 GPNMBQ14956 572 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 PTPRRQ15256 657 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 GPR162Q16538 588 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 PGS1Q32NB8 556 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 PTCHD3Q3KNS1 767 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 IQCCQ4KMZ1 466 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 SPIN4Q56A73 249 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 SGO1Q5FBB7 561 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 OR4F3Q6IEY1 312 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 C22orf39Q6P5X5 142 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 CEP68Q76N32 757 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 ZNF551Q7Z340 670 aaPredicted RBP9.54□□□□□ -0.88
SURF1-204ENST00000495952 TMEM150AQ86TG1 271 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 RAVER1Q8IY67 606 aaKnown RBP9.54□□□□□ -0.88
SURF1-204ENST00000495952 ADGRG2Q8IZP9 1017 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 C10orf111Q8N326 155 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 VPS37AQ8NEZ2 397 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 CLHC1Q8NHS4 586 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 C9orf43Q8TAL5 461 aaPredicted RBP9.54□□□□□ -0.88
SURF1-204ENST00000495952 WFDC5Q8TCV5 224 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 PXYLP1Q8TE99 480 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 GLMNQ92990 594 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 MYDGFQ969H8 173 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 SLC38A4Q969I6 547 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 TAMM41Q96BW9 452 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 C11orf24Q96F05 449 aaPredicted RBP9.54□□□□□ -0.88
SURF1-204ENST00000495952 ASIC4Q96FT7 647 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 APIPQ96GX9 242 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 HSH2DQ96JZ2 352 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 BTBD2Q9BX70 525 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 ITPAQ9BY32 194 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 MMP27Q9H306 513 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 CPNE5Q9HCH3 593 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 THSD1Q9NS62 852 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 FKBP14Q9NWM8 211 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 THUMPD1Q9NXG2 353 aaKnown RBP9.54□□□□□ -0.88
SURF1-204ENST00000495952 SELENONQ9NZV5 590 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 PDP1Q9P0J1 537 aaPredicted RBP9.54□□□□□ -0.88
SURF1-204ENST00000495952 ERVK-18Q9QC07 812 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 VPS29Q9UBQ0 182 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 OSGIN1Q9UJX0 560 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 POFUT2Q9Y2G5 429 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 SAMHD1Q9Y3Z3 626 aaKnown RBP9.54□□□□□ -0.88
SURF1-204ENST00000495952 UGT2A1Q9Y4X1 527 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 PCDHGB3Q9Y5G1 929 aa9.54□□□□□ -0.88
SURF1-204ENST00000495952 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.53□□□□□ -0.88
SURF1-204ENST00000495952 TSPAN11A1L157 253 aa9.53□□□□□ -0.88
SURF1-204ENST00000495952 C1orf226A1L170 272 aa9.53□□□□□ -0.88
SURF1-204ENST00000495952 KRBA1A5PL33 1030 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms