RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 PHLDA1Q8WV24 401 aaPredicted RBP3.07□□□□□ -1.92
VPS50-219ENST00000495039 ARHGAP45Q92619 1136 aa3.07□□□□□ -1.92
VPS50-219ENST00000495039 AZIN2Q96A70 460 aa3.07□□□□□ -1.92
VPS50-219ENST00000495039 VPS33AQ96AX1 596 aa3.07□□□□□ -1.92
VPS50-219ENST00000495039 MOB3AQ96BX8 217 aa3.07□□□□□ -1.92
VPS50-219ENST00000495039 FNBP1Q96RU3 617 aa3.07□□□□□ -1.92
VPS50-219ENST00000495039 FEVQ99581 238 aa3.07□□□□□ -1.92
VPS50-219ENST00000495039 RAD9AQ99638 391 aa3.07□□□□□ -1.92
VPS50-219ENST00000495039 BAG1Q99933 345 aaPredicted RBP3.07□□□□□ -1.92
VPS50-219ENST00000495039 OR10A4Q9H209 315 aa3.07□□□□□ -1.92
VPS50-219ENST00000495039 SPHK2Q9NRA0 654 aa3.07□□□□□ -1.92
VPS50-219ENST00000495039 FGF21Q9NSA1 209 aa3.07□□□□□ -1.92
VPS50-219ENST00000495039 PANK4Q9NVE7 773 aa3.07□□□□□ -1.92
VPS50-219ENST00000495039 C5AR2Q9P296 337 aa3.07□□□□□ -1.92
VPS50-219ENST00000495039 NRBP1Q9UHY1 535 aa3.07□□□□□ -1.92
VPS50-219ENST00000495039 RNF150Q9ULK6 438 aa3.07□□□□□ -1.92
VPS50-219ENST00000495039 CCL27Q9Y4X3 112 aa3.07□□□□□ -1.92
VPS50-219ENST00000495039 MYH15Q9Y2K3 1946 aa3.07□□□□□ -1.92
VPS50-219ENST00000495039 ACOD1A6NK06 481 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 SRRM5B3KS81 715 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 CLDN4O14493 209 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 MAGEC1O60732 1142 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 SLCO2B1O94956 709 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 ATP5BP06576 529 aaKnown RBP3.06□□□□□ -1.92
VPS50-219ENST00000495039 CCDC175P0C221 793 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 ATRXP46100 2492 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 HLCSP50747 726 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 COL4A4P53420 1690 aaPredicted RBP3.06□□□□□ -1.92
VPS50-219ENST00000495039 LIMK1P53667 647 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 PAX9P55771 341 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 MAZP56270 477 aaKnown RBP3.06□□□□□ -1.92
VPS50-219ENST00000495039 B3GALT5-AS1P59052 145 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 POLR2LP62875 67 aaKnown RBP3.06□□□□□ -1.92
VPS50-219ENST00000495039 CYCSP99999 105 aaKnown RBP3.06□□□□□ -1.92
VPS50-219ENST00000495039 ACSM1Q08AH1 577 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 ZNF415Q09FC8 603 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 VEZF1Q14119 521 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 CA9Q16790 459 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 MOGAT2Q3SYC2 334 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 MCMDC2Q4G0Z9 681 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 C1orf141Q5JVX7 400 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 C20orf194Q5TEA3 1177 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 RTN4RL2Q86UN3 420 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 SLC47A2Q86VL8 602 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 KCNMB4Q86W47 210 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 PI4KAP1Q8N8J0 262 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 OR11H4Q8NGC9 324 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 ROBO4Q8WZ75 1007 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 MRPS27Q92552 414 aaKnown RBP3.06□□□□□ -1.92
VPS50-219ENST00000495039 CENPTQ96BT3 561 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 RADILQ96JH8 1075 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 CPNE1Q99829 537 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 PANK2Q9BZ23 570 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 TEX10Q9NXF1 929 aaPredicted RBP3.06□□□□□ -1.92
VPS50-219ENST00000495039 TBC1D7Q9P0N9 293 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.06□□□□□ -1.92
VPS50-219ENST00000495039 TRIM17Q9Y577 477 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 ANGPTL3Q9Y5C1 460 aa3.06□□□□□ -1.92
VPS50-219ENST00000495039 ABCA7Q8IZY2 2146 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 C2orf81A6NN90 581 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 C15orf61A6NNL5 157 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 ENO4A6NNW6 628 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 MPTX1A8MV57 137 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 PTGESO14684 152 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 CENPBP07199 599 aaPredicted RBP3.05□□□□□ -1.92
VPS50-219ENST00000495039 SAGP10523 405 aaPredicted RBP3.05□□□□□ -1.92
VPS50-219ENST00000495039 HAPLN1P10915 354 aaPredicted RBP3.05□□□□□ -1.92
VPS50-219ENST00000495039 CDH3P22223 829 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 RPL21P46778 160 aaKnown RBP3.05□□□□□ -1.92
VPS50-219ENST00000495039 LHX1P48742 406 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 RAD23AP54725 363 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 TMEM50BP56557 158 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 CAMK2DQ13557 499 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 CUL3Q13618 768 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 COG2Q14746 738 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 UGT3A2Q3SY77 523 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 SPDYCQ5MJ68 293 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 CCDC186Q7Z3E2 898 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 CAMKVQ8NCB2 501 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 LINC00167Q96N53 147 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 ZNF558Q96NG5 402 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 NAA11Q9BSU3 229 aaPredicted RBP3.05□□□□□ -1.92
VPS50-219ENST00000495039 ANKRD2Q9GZV1 360 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 TRPV4Q9HBA0 871 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 CDH20Q9HBT6 801 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 TMED3Q9Y3Q3 217 aa3.05□□□□□ -1.92
VPS50-219ENST00000495039 ASB14A6NK59 587 aa3.04□□□□□ -1.92
VPS50-219ENST00000495039 H7C0S8 307 aa3.04□□□□□ -1.92
VPS50-219ENST00000495039 DFFBO76075 338 aa3.04□□□□□ -1.92
VPS50-219ENST00000495039 ACSL3O95573 720 aa3.04□□□□□ -1.92
VPS50-219ENST00000495039 IGHV4-31P0DP07 118 aa3.04□□□□□ -1.92
VPS50-219ENST00000495039 IRF2P14316 349 aa3.04□□□□□ -1.92
VPS50-219ENST00000495039 CYP11B2P19099 503 aa3.04□□□□□ -1.92
VPS50-219ENST00000495039 CD22P20273 847 aa3.04□□□□□ -1.92
VPS50-219ENST00000495039 AZGP1P25311 298 aaKnown RBP3.04□□□□□ -1.92
VPS50-219ENST00000495039 CSTF2P33240 577 aaKnown RBP eCLIP3.04□□□□□ -1.92
VPS50-219ENST00000495039 HSPA4P34932 840 aa3.04□□□□□ -1.92
VPS50-219ENST00000495039 PTGER4P35408 488 aa3.04□□□□□ -1.92
VPS50-219ENST00000495039 ZFP36L1Q07352 338 aaKnown RBP3.04□□□□□ -1.92
VPS50-219ENST00000495039 KLC1Q07866 573 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms