RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 PCDHGA2Q9Y5H1 932 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 YY2O15391 372 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 DDNO94850 711 aaPredicted RBP14.88□□□□□ -0.03
SDF4-207ENST00000494748 KRT8P05787 483 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 PRPH2P23942 346 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 ARMCX4Q5H9R4 360 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 PDE12Q6L8Q7 609 aaKnown RBP14.88□□□□□ -0.03
SDF4-207ENST00000494748 MYDGFQ969H8 173 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 CCDC32Q9BV29 185 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 FBXO44Q9H4M3 255 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 IL17CQ9P0M4 197 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 UBA2Q9UBT2 640 aaPredicted RBP14.88□□□□□ -0.03
SDF4-207ENST00000494748 KLK4Q9Y5K2 254 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 RFXANKO14593 260 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 ENGP17813 658 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 E2F2Q14209 437 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 TOR1AIP1Q5JTV8 583 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 GATAD2AQ86YP4 633 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 SYNPOQ8N3V7 929 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 MAGEH1Q9H213 219 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 ADARB2Q9NS39 739 aaKnown RBP14.88□□□□□ -0.03
SDF4-207ENST00000494748 RLIMQ9NVW2 624 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 ADPRHL2Q9NX46 363 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 RPS6KA6Q9UK32 745 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 CFAP20Q9Y6A4 193 aaKnown RBP14.88□□□□□ -0.03
SDF4-207ENST00000494748 V9GYH0 126 aa14.88□□□□□ -0.03
SDF4-207ENST00000494748 CLIC1O00299 241 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 STX7O15400 261 aaKnown RBP14.87□□□□□ -0.03
SDF4-207ENST00000494748 KDELR3O43731 214 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 KIAA0513O60268 411 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 ZNF623O75123 536 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 GCM2O75603 506 aaPredicted RBP14.87□□□□□ -0.03
SDF4-207ENST00000494748 LRATO95237 230 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 CD160O95971 181 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 CHRNB1P11230 501 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 KCNQ1P51787 676 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 FAM189BP81408 668 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 GALK2Q01415 458 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 CACNG1Q06432 222 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 MGAT3Q09327 533 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 FBXO43Q4G163 708 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 APIPQ96GX9 242 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 FAM126AQ9BYI3 521 aaPredicted RBP14.87□□□□□ -0.03
SDF4-207ENST00000494748 SLC29A3Q9BZD2 475 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 PCDHB8Q9UN66 801 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 HELZP42694 1942 aaKnown RBP14.87□□□□□ -0.03
SDF4-207ENST00000494748 PDZK1P1A8MUH7 402 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 A8MV72 311 aaPredicted RBP14.87□□□□□ -0.03
SDF4-207ENST00000494748 LOC110117498-PIK3R3F6TDL0 507 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 ARHGEF15O94989 841 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 CTSHP09668 335 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 SLC15A1P46059 708 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 PIK3R3Q92569 461 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 COL21A1Q96P44 957 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 APOL5Q9BWW9 433 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 TAPBPLQ9BX59 468 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 WWOXQ9NZC7 414 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 WBP11Q9Y2W2 641 aaKnown RBP14.87□□□□□ -0.03
SDF4-207ENST00000494748 PCDHB1Q9Y5F3 818 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 MAU2Q9Y6X3 613 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 PURAQ00577 322 aaKnown RBP14.87□□□□□ -0.03
SDF4-207ENST00000494748 RING1Q06587 406 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 SSX1Q16384 188 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 P3H2Q8IVL5 708 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 STK40Q8N2I9 435 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 OR5M11Q96RB7 305 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 BARHL1Q9BZE3 327 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 MUTYHQ9UIF7 546 aa14.87□□□□□ -0.03
SDF4-207ENST00000494748 NOTOA8MTQ0 251 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 ALX3O95076 343 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 RPS3P23396 243 aaKnown RBP eCLIP14.86□□□□□ -0.034e-7■■■□□ 15.2
SDF4-207ENST00000494748 DEFA1P59665 94 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 DEFA3P59666 94 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 TP53BP2Q13625 1128 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 STARD3Q14849 445 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 ZNF79Q15937 498 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 CCDC58Q4VC31 144 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 ZMAT1Q5H9K5 638 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 RGMBQ6NW40 437 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 TTC23LQ6PF05 361 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 MSANTD1Q6ZTZ1 278 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 RASAL3Q86YV0 1011 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 SIMC1Q8NDZ2 872 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 OR4C15Q8NGM1 316 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 MS4A4AQ96JQ5 239 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 GRIP1Q9Y3R0 1128 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 M0R129 80 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 MFN2O95140 757 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 NUDT7P0C024 238 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 RRM2P31350 389 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 TNFSF8P32971 234 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 SGSHP51688 502 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 UGT8Q16880 541 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 DUOXA1Q1HG43 343 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 C10orf120Q5SQS8 335 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 C10orf62Q5T681 223 aaPredicted RBP14.86□□□□□ -0.03
SDF4-207ENST00000494748 GPRC6AQ5T6X5 926 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 ASB15Q8WXK1 588 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 FCRL1Q96LA6 429 aa14.86□□□□□ -0.03
SDF4-207ENST00000494748 FEVQ99581 238 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms