RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 VPS26BQ4G0F5 336 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 RABL3Q5HYI8 236 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 C1orf141Q5JVX7 400 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 ADGRF1Q5T601 910 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 IER5Q5VY09 327 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 TRIQKQ629K1 86 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 LAIR2Q6ISS4 152 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 ACAD10Q6JQN1 1059 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 GCNT7Q6ZNI0 430 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 TRMT1LQ7Z2T5 733 aaKnown RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 PLEKHH3Q7Z736 793 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 SLC9B2Q86UD5 537 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 RFX6Q8HWS3 928 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 SLC34A3Q8N130 599 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 PLD6Q8N2A8 252 aaKnown RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 LIX1Q8N485 282 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 MYCT1Q8N699 235 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 ARFGAP1Q8N6T3 406 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 C19orf18Q8NEA5 215 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 OR9A2Q8NGT5 310 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 SETD6Q8TBK2 473 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 RNF139Q8WU17 664 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 HAS1Q92839 578 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 SLC38A4Q969I6 547 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 MFSD3Q96ES6 412 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 SPACA7Q96KW9 195 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 SENP8Q96LD8 212 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 ZDHHC15Q96MV8 337 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 TEFMQ96QE5 360 aaKnown RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 SLC38A3Q99624 504 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 MYOCQ99972 504 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 ITPAQ9BY32 194 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 HEXA-AS1Q9H8Q6 139 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 SMURF1Q9HCE7 757 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 ACOT13Q9NPJ3 140 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 SNTG1Q9NSN8 517 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 KCMF1Q9P0J7 381 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 DHCR7Q9UBM7 475 aaKnown RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 CD300AQ9UGN4 299 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 NDRG3Q9UGV2 375 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 GPR160Q9UJ42 338 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 NOCTQ9UK39 431 aaKnown RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 LHX6Q9UPM6 363 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 TLR6Q9Y2C9 796 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 TPRKBQ9Y3C4 175 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 TEX264Q9Y6I9 313 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 NID2Q14112 1375 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 SBF2Q86WG5 1849 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 TNRC6CQ9HCJ0 1690 aaKnown RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 WDR90Q96KV7 1748 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 A0A096LPI6 279 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 RHPN2P1A8MT19 583 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 KPNA7A9QM74 516 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 TISP43B9A030 160 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 E7ESA3 106 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 F8VP50 259 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 M0QYV0 167 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 CACNB4O00305 520 aaPredicted RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 FOXE1O00358 373 aaPredicted RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 RAD1O60671 282 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 PEX10O60683 326 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 LILRB3O75022 631 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 RBBP9O75884 186 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 CNTN5O94779 1100 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 CELF2O95319 508 aaKnown RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 RAB3DO95716 219 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 IFNA4P05014 189 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 RPLP0P05388 317 aaKnown RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 ALPIP09923 528 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 YBX3P16989 372 aaKnown RBP eCLIP3.93□□□□□ -1.78
ATG3-207ENST00000494571 RHCEP18577 417 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 CPN2P22792 545 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 HLA-DMAP28067 261 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 C21orf33P30042 268 aaPredicted RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 S100A7P31151 101 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 TGFBR2P37173 567 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 MAP2K3P46734 347 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 MAN2A2P49641 1150 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 RGS19P49795 217 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 PSEN2P49810 448 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 SULT1E1P49888 294 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 BCAT1P54687 386 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 PSMD4P55036 377 aaKnown RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 RPL7AP62424 266 aaKnown RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 RAC1P63000 192 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 CDK5R2Q13319 367 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 DPYSL3Q14195 570 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 SLC9A5Q14940 896 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 TRAM1Q15629 374 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 EIF2S3LQ2VIR3 472 aaKnown RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 PABPC1L2AQ5JQF8 200 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 BCL2L15Q5TBC7 163 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 OTUD1Q5VV17 481 aaPredicted RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 LIPNQ5VXI9 398 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 SAXO2Q658L1 398 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 ZNF57Q68EA5 555 aaPredicted RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 ARHGAP17Q68EM7 881 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 NADSYN1Q6IA69 706 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 NPNTQ6UXI9 565 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 CATSPERGQ6ZRH7 1159 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms