RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 FOXE1O00358 373 aaPredicted RBP15.93■□□□□ 0.14
ATG4B-225ENST00000494465 SH3BGRLO75368 114 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 CD72P21854 359 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 PTPN6P29350 595 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 S100A3P33764 101 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 OR4D2P58180 307 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 ACSM2AQ08AH3 577 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 SMAD4Q13485 552 aaKnown RBP15.93■□□□□ 0.14
ATG4B-225ENST00000494465 IRAK1BP1Q5VVH5 260 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 ACSM2BQ68CK6 577 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 KIAA1324Q6UXG2 1013 aaKnown RBP15.93■□□□□ 0.14
ATG4B-225ENST00000494465 TICAM1Q8IUC6 712 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 TBC1D21Q8IYX1 336 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 C1orf52Q8N6N3 182 aaKnown RBP15.93■□□□□ 0.14
ATG4B-225ENST00000494465 ZNF740Q8NDX6 193 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 CANT1Q8WVQ1 401 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 GFM2Q969S9 779 aaKnown RBP15.93■□□□□ 0.14
ATG4B-225ENST00000494465 REPS1Q96D71 796 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 TRIT1Q9H3H1 467 aaKnown RBP15.93■□□□□ 0.14
ATG4B-225ENST00000494465 MUC13Q9H3R2 512 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 FGF22Q9HCT0 170 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 SNX13Q9Y5W8 968 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 MTHFD1P11586 935 aaKnown RBP15.93■□□□□ 0.14
ATG4B-225ENST00000494465 CDH1P12830 882 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 GLULP15104 373 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 CLDN2P57739 230 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 C21orf58P58505 322 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 MTAPQ13126 283 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 UGT8Q16880 541 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 PAGE2BQ5JRK9 111 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 EOGTQ5NDL2 527 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 LRIF1Q5T3J3 769 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 THEMIS2Q5TEJ8 643 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 FAM129CQ86XR2 697 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 OSGEPL1Q9H4B0 414 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 PIF1Q9H611 641 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 DMRT3Q9NQL9 472 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 MMP17Q9ULZ9 603 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 LRCH1Q9Y2L9 728 aa15.93■□□□□ 0.14
ATG4B-225ENST00000494465 TMEM265A0A087WTH1 108 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 A0A1W2PPV9 198 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 TCRBV5S2A0A599 114 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 CACNB4O00305 520 aaPredicted RBP15.92■□□□□ 0.14
ATG4B-225ENST00000494465 ACADMP11310 421 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 NCK1P16333 377 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 GABRG2P18507 467 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 PRPS1L1P21108 318 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 HRH2P25021 359 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 TPMTP51580 245 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 TFF2Q03403 129 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 CLCA4Q14CN2 919 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 GTDC1Q4AE62 458 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 FBXO43Q4G163 708 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 RUNDC3AQ59EK9 446 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 TMEM31Q5JXX7 168 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 C10orf62Q5T681 223 aaPredicted RBP15.92■□□□□ 0.14
ATG4B-225ENST00000494465 SYT12Q8IV01 421 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 ZNF583Q96ND8 569 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 HAUS8Q9BT25 410 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 INPP5KQ9BT40 448 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 KCNH6Q9H252 994 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 VCX3BQ9H321 246 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 ARMC1Q9NVT9 282 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 TRIOBPQ9H2D6 2365 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 HEATR5BQ9P2D3 2071 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 TCRBV21S2A2A0A5A6 115 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 PRMT3O60678 531 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 STAMBPO95630 424 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 HOXC4P09017 264 aaPredicted RBP15.92■□□□□ 0.14
ATG4B-225ENST00000494465 HSD17B2P37059 387 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 AQP4P55087 323 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 SPIN4Q56A73 249 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 DNAJC14Q6Y2X3 702 aaPredicted RBP15.92■□□□□ 0.14
ATG4B-225ENST00000494465 VN1R5Q7Z5H4 357 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 TRIM69Q86WT6 500 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 PLCD3Q8N3E9 789 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 LINC01555Q8NAE3 123 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 GOLM1Q8NBJ4 401 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 OR7A2PQ8NGA2 310 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 LRTOMTQ8WZ04 291 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 FAM3CQ92520 227 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 C12orf66Q96MD2 445 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 ACAT2Q9BWD1 397 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 TRIM15Q9C019 465 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 CCM2LQ9NUG4 571 aaPredicted RBP15.92■□□□□ 0.14
ATG4B-225ENST00000494465 SPATA7Q9P0W8 599 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 TAC3Q9UHF0 121 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 CA5BQ9Y2D0 317 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 TSC22D4Q9Y3Q8 395 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 PCDHB3Q9Y5E6 796 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 PCDHB14Q9Y5E9 798 aa15.92■□□□□ 0.14
ATG4B-225ENST00000494465 NUP214P35658 2090 aaPredicted RBP15.92■□□□□ 0.14
ATG4B-225ENST00000494465 C10orf142B7Z368 130 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 H0Y8X5 98 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 AKAP10O43572 662 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 SCN2BO60939 215 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 SOX11P35716 441 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 WNT3P56703 355 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 LAPTM5Q13571 262 aa15.91■□□□□ 0.14
ATG4B-225ENST00000494465 PGS1Q32NB8 556 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms