RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 SFXN2Q96NB2 322 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 GAL3ST4Q96RP7 486 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 HNRNPABQ99729 332 aaKnown RBP2.18□□□□□ -2.06
LMNB1-207ENST00000494185 FSD1Q9BTV5 496 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 LMF2Q9BU23 707 aaKnown RBP2.18□□□□□ -2.06
LMNB1-207ENST00000494185 TRIM7Q9C029 511 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 ABCG4Q9H172 646 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 DPAGT1Q9H3H5 408 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 SDF2L1Q9HCN8 221 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 ZDHHC18Q9NUE0 388 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 PTTG2Q9NZH5 202 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 HMG20BQ9P0W2 317 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 MDFICQ9P1T7 246 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 C19orf25Q9UFG5 118 aaPredicted RBP2.18□□□□□ -2.06
LMNB1-207ENST00000494185 ZDHHC2Q9UIJ5 367 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 HOOK1Q9UJC3 728 aaKnown RBP2.18□□□□□ -2.06
LMNB1-207ENST00000494185 FBXL5Q9UKA1 691 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 CPSF3Q9UKF6 684 aaKnown RBP2.18□□□□□ -2.06
LMNB1-207ENST00000494185 GRID1Q9ULK0 1009 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 KCNJ14Q9UNX9 436 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 PIN4Q9Y237 131 aaKnown RBP2.18□□□□□ -2.06
LMNB1-207ENST00000494185 C13orf42A0A1B0GVH6 325 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 HYKKA2RU49 373 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 KRT87PA6NCN2 255 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 NEMP2A6NFY4 417 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 NDC80O14777 642 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 AP5Z1O43299 807 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 VEGFDO43915 354 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 SELENOFO60613 162 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 AKAP3O75969 853 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 LUC7L3O95232 432 aaKnown RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 CSN3P07498 182 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 PRSS56P0CW18 603 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 C8orf89P0DMQ9 161 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 SPP1P10451 314 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 SAGP10523 405 aaPredicted RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 ACP2P11117 423 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 TCF4P15884 667 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 VCLP18206 1134 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 CD22P20273 847 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 HPDP32754 393 aaPredicted RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 DCTP40126 519 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 RGS7P49802 495 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 GMPSP49915 693 aaPredicted RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 GPC3P51654 580 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 LUMP51884 338 aaPredicted RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 ZNF131P52739 623 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 MFAP3P55082 362 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 ADARP55265 1226 aaKnown RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 CDH11P55287 796 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 HILS1P60008 231 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 SNRPD1P62314 119 aaKnown RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 POLR2LP62875 67 aaKnown RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 CX3CL1P78423 397 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 PNRC1Q12796 327 aaPredicted RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 GPR17Q13304 367 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 TNK1Q13470 666 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 CUL3Q13618 768 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 HFEQ30201 348 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 ZC2HC1CQ53FD0 456 aaPredicted RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 PDLIM3Q53GG5 364 aaPredicted RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 ELFN2Q5R3F8 820 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 WLSQ5T9L3 541 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 GRTP1Q5TC63 336 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 MEX3BQ6ZN04 569 aaKnown RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 TMPRSS11FQ6ZWK6 438 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 ANO5Q75V66 913 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 MARK2Q7KZI7 788 aaKnown RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 MIER3Q7Z3K6 550 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 COMMD2Q86X83 199 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 FAM114A1Q8IWE2 563 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 HSCBQ8IWL3 235 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 CFAP206Q8IYR0 622 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 MARVELD2Q8N4S9 558 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 CPSF7Q8N684 471 aaKnown RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 UXS1Q8NBZ7 420 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 CNNM3Q8NE01 707 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 ANKRD20A12PQ8NF67 263 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 SLC13A3Q8WWT9 602 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 NSMAFQ92636 917 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 RIT1Q92963 219 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 SLC47A1Q96FL8 570 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 WBP1Q96G27 269 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 C5orf30Q96GV9 206 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 RUNDC3BQ96NL0 473 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 TSGA13Q96PP4 275 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 PSD2Q9BQI7 771 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 BTBD10Q9BSF8 475 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 MCRIP2Q9BUT9 160 aaKnown RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 TRAF4Q9BUZ4 470 aaPredicted RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 ABCG8Q9H221 673 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 P2RY12Q9H244 342 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 MINDY3Q9H8M7 445 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 TBC1D17Q9HA65 648 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 RNPEPL1Q9HAU8 725 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 ACKR4Q9NPB9 350 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 MYNNQ9NPC7 610 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 SLC52A3Q9NQ40 469 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 GKN1Q9NS71 199 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms