RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 COMMD2Q86X83 199 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 ARHGAP24Q8N264 748 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 Q8NFD4 153 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 OR10G8Q8NGN5 311 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 SSMEM1Q8WWF3 244 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 IRGQQ8WZA9 623 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 SLC45A3Q96JT2 553 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 LINC00167Q96N53 147 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 NECTIN4Q96NY8 510 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 FNBP1Q96RU3 617 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 FEVQ99581 238 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 SEPHS2Q99611 448 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 ZHX1Q9UKY1 873 aaPredicted RBP3.33□□□□□ -1.88
SMC4-223ENST00000493695 TRIM17Q9Y577 477 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 HCFC1P51610 2035 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 A0A1W2PPR1 153 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 DFFBO76075 338 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 GGPS1O95749 300 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 ATP5BP06576 529 aaKnown RBP3.32□□□□□ -1.88
SMC4-223ENST00000493695 QDPRP09417 244 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 MATR3P43243 847 aaKnown RBP eCLIP3.32□□□□□ -1.88
SMC4-223ENST00000493695 RPL21P46778 160 aaKnown RBP3.32□□□□□ -1.88
SMC4-223ENST00000493695 ASCL1P50553 236 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 CLDN15P56746 228 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 RBPJQ06330 500 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 ITGA7Q13683 1181 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 MTHFSDQ2M296 383 aaKnown RBP3.32□□□□□ -1.88
SMC4-223ENST00000493695 SPDYCQ5MJ68 293 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 C6orf163Q5TEZ5 329 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 BTN2A1Q7KYR7 527 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 NKAIN3Q8N8D7 197 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 RFT1Q96AA3 541 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 VPS33AQ96AX1 596 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 PDLIM5Q96HC4 596 aaKnown RBP3.32□□□□□ -1.88
SMC4-223ENST00000493695 CYYR1Q96J86 154 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 AGAP4Q96P64 663 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 NAA11Q9BSU3 229 aaPredicted RBP3.32□□□□□ -1.88
SMC4-223ENST00000493695 EDEM3Q9BZQ6 932 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 SLC24A2Q9UI40 661 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 PADI2Q9Y2J8 665 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 LIPGQ9Y5X9 500 aa3.32□□□□□ -1.88
SMC4-223ENST00000493695 ANKRD61A6NGH8 418 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 SRRM5B3KS81 715 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 CSN3P07498 182 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 OR52Z1P0C646 297 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 ZBTB25P24278 435 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 PTAFRP25105 342 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 PIK3R1P27986 724 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 PTGER4P35408 488 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 LHX1P48742 406 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 LBX1P52954 281 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 POLR2LP62875 67 aaKnown RBP3.31□□□□□ -1.88
SMC4-223ENST00000493695 ACSM1Q08AH1 577 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 TFCP2Q12800 502 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 CA9Q16790 459 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 FAM133BQ5BKY9 247 aaKnown RBP3.31□□□□□ -1.88
SMC4-223ENST00000493695 KRBOX4Q5JUW0 171 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 SPECC1Q5M775 1068 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 C20orf194Q5TEA3 1177 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 MFSD12Q6NUT3 480 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 KRT77Q7Z794 578 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 SLFN11Q7Z7L1 901 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 SLC25A42Q86VD7 318 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 CFAP206Q8IYR0 622 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 GPD1LQ8N335 351 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.31□□□□□ -1.88
SMC4-223ENST00000493695 OR6J1Q8NGC5 347 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 MAPK15Q8TD08 544 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 CHPT1Q8WUD6 406 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 CCDC107Q8WV48 283 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 ROBO4Q8WZ75 1007 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 FER1L6-AS2Q96M78 137 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 SFXN2Q96NB2 322 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 CPNE1Q99829 537 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 URM1Q9BTM9 101 aaKnown RBP3.31□□□□□ -1.88
SMC4-223ENST00000493695 AP1M1Q9BXS5 423 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 SPHK1Q9NYA1 384 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 OR6C2Q9NZP2 312 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 CACNG4Q9UBN1 327 aa3.31□□□□□ -1.88
SMC4-223ENST00000493695 A0A087WV48 116 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 A0A1W2PPK0 400 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 A8MXK9 166 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 THEGLP0DJG4 465 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 SMIM18P0DKX4 95 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 HAPLN1P10915 354 aaPredicted RBP3.3□□□□□ -1.88
SMC4-223ENST00000493695 CD22P20273 847 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 PTPN3P26045 913 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 CAPGP40121 348 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 ALDH3A2P51648 485 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 ZNF273Q14593 569 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 RFTN1Q14699 578 aaPredicted RBP3.3□□□□□ -1.88
SMC4-223ENST00000493695 ITPRIPL2Q3MIP1 535 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 UGT3A2Q3SY77 523 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 ELFN2Q5R3F8 820 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 C6orf136Q5SQH8 315 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 ERN2Q76MJ5 926 aaKnown RBP3.3□□□□□ -1.88
SMC4-223ENST00000493695 DET1Q7L5Y6 550 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 ZBED8Q8IZ13 594 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 FGFRL1Q8N441 504 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 TTC30BQ8N4P2 665 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms