RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 KCTD4Q8WVF5 259 aa12.24□□□□□ -0.45
CLIP2-209ENST00000493166 ISL2Q96A47 359 aa12.24□□□□□ -0.45
CLIP2-209ENST00000493166 RERGQ96A58 199 aaPredicted RBP12.24□□□□□ -0.45
CLIP2-209ENST00000493166 RHBDF1Q96CC6 855 aa12.24□□□□□ -0.45
CLIP2-209ENST00000493166 NXNL1Q96CM4 212 aa12.24□□□□□ -0.45
CLIP2-209ENST00000493166 PRAP1Q96NZ9 151 aa12.24□□□□□ -0.45
CLIP2-209ENST00000493166 OR4K3Q96R72 315 aa12.24□□□□□ -0.45
CLIP2-209ENST00000493166 CCDC77Q9BR77 488 aa12.24□□□□□ -0.45
CLIP2-209ENST00000493166 DHRS4Q9BTZ2 278 aa12.24□□□□□ -0.45
CLIP2-209ENST00000493166 STARD5Q9NSY2 213 aa12.24□□□□□ -0.45
CLIP2-209ENST00000493166 PCMTD2Q9NV79 361 aa12.24□□□□□ -0.45
CLIP2-209ENST00000493166 TMEM184CQ9NVA4 438 aa12.24□□□□□ -0.45
CLIP2-209ENST00000493166 WWOXQ9NZC7 414 aa12.24□□□□□ -0.45
CLIP2-209ENST00000493166 CD274Q9NZQ7 290 aa12.24□□□□□ -0.45
CLIP2-209ENST00000493166 FETUBQ9UGM5 382 aa12.24□□□□□ -0.45
CLIP2-209ENST00000493166 DYRK1BQ9Y463 629 aa12.24□□□□□ -0.45
CLIP2-209ENST00000493166 SCN3AQ9NY46 2000 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 LOC105369274A0A096LPK9 316 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 LOC102723532A0A0G2JNH3 316 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 SYCE1LA8MT33 242 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 SUPT3HB4E1H0 165 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 C21orf140B9A014 251 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 H0YGG7 62 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 K7ENP7 123 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 EFSO43281 561 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 KERAO60938 352 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 SUPT3HO75486 399 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 WDR47O94967 919 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 KLHL2O95198 593 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 WT1P19544 449 aaPredicted RBP12.23□□□□□ -0.45
CLIP2-209ENST00000493166 AGXTP21549 392 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 GCAP28676 217 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 RORAP35398 523 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 GRK3P35626 688 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 MAGEA12P43365 314 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 GLRBP48167 497 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 CCR8P51685 355 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 ARSFP54793 590 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 ARF3P61204 181 aaPredicted RBP12.23□□□□□ -0.45
CLIP2-209ENST00000493166 RPS15AP62244 130 aaKnown RBP12.23□□□□□ -0.45
CLIP2-209ENST00000493166 RELAQ04206 551 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 DNASE1L3Q13609 305 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 ERCC6LQ2NKX8 1250 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 CDKL4Q5MAI5 379 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 WASHC2DQ5SRD0 308 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 C1orf189Q5VU69 101 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 SULT1C3Q6IMI6 304 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 RHBDD2Q6NTF9 364 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 WDR93Q6P2C0 686 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 FAM199XQ6PEV8 388 aaPredicted RBP12.23□□□□□ -0.45
CLIP2-209ENST00000493166 INO80CQ6PI98 192 aaPredicted RBP12.23□□□□□ -0.45
CLIP2-209ENST00000493166 ADGRD1Q6QNK2 874 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 ISCA2Q86U28 154 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 THOC6Q86W42 341 aaKnown RBP12.23□□□□□ -0.45
CLIP2-209ENST00000493166 OR4N4Q8N0Y3 316 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 PDPRQ8NCN5 879 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 PROKR1Q8TCW9 393 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 MTBPQ96DY7 904 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 TSNARE1Q96NA8 513 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 ZNF285Q96NJ3 590 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 DPH2Q9BQC3 489 aaPredicted RBP12.23□□□□□ -0.45
CLIP2-209ENST00000493166 PRORYQ9H606 182 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 CNOT10Q9H9A5 744 aaKnown RBP12.23□□□□□ -0.45
CLIP2-209ENST00000493166 AKIRIN1Q9H9L7 192 aaPredicted RBP12.23□□□□□ -0.45
CLIP2-209ENST00000493166 NUDT4Q9NZJ9 180 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 PSMC3IPQ9P2W1 217 aaPredicted RBP12.23□□□□□ -0.45
CLIP2-209ENST00000493166 DHCR7Q9UBM7 475 aaKnown RBP12.23□□□□□ -0.45
CLIP2-209ENST00000493166 KCND3Q9UK17 655 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 RALYQ9UKM9 306 aaKnown RBP12.23□□□□□ -0.45
CLIP2-209ENST00000493166 SLC22A14Q9Y267 594 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 PCDHGA4Q9Y5G9 962 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 NUP210LQ5VU65 1888 aa12.23□□□□□ -0.45
CLIP2-209ENST00000493166 IQANK1A0A1B0GTG1 560 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 CCDC189A1A4V9 331 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 FITM1A5D6W6 292 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 ZNF891A8MT65 544 aaPredicted RBP12.22□□□□□ -0.45
CLIP2-209ENST00000493166 C9J4A7 227 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 UBXN8O00124 270 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 KATNA1O75449 491 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 IPO13O94829 963 aaKnown RBP12.22□□□□□ -0.45
CLIP2-209ENST00000493166 ATXN8OSP0DMR3 200 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 F8A1P23610 371 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 SLC6A12P48065 614 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 CSNK1G2P78368 415 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 COL9A2Q14055 689 aaPredicted RBP12.22□□□□□ -0.45
CLIP2-209ENST00000493166 ACAP2Q15057 778 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 FAM214AQ32MH5 1076 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 C18orf21Q32NC0 220 aaPredicted RBP12.22□□□□□ -0.45
CLIP2-209ENST00000493166 YOD1Q5VVQ6 348 aaPredicted RBP12.22□□□□□ -0.45
CLIP2-209ENST00000493166 ZNF517Q6ZMY9 492 aaPredicted RBP12.22□□□□□ -0.45
CLIP2-209ENST00000493166 TTLL10Q6ZVT0 673 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 GPR155Q7Z3F1 870 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 PLD3Q8IV08 490 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 KLHDC8AQ8IYD2 350 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 CSNK1A1LQ8N752 337 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 RHEBL1Q8TAI7 183 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 SLC5A11Q8WWX8 675 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 STARD8Q92502 1023 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 NEIL2Q969S2 332 aa12.22□□□□□ -0.45
CLIP2-209ENST00000493166 SLC45A3Q96JT2 553 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms