RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	ERI2	A8K979	691 aa	Known RBP	12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	ARHGEF33	A8MVX0	844 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	MAN1A2	O60476	641 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	SEC24D	O94855	1032 aa	Predicted RBP	12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	MATN4	O95460	622 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	FTCD	O95954	541 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	GAS8	O95995	478 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	PPARG	P37231	505 aa	Predicted RBP	12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	EMP3	P54852	163 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	EIF3B	P55884	814 aa	Known RBP	12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	TESK1	Q15569	626 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	ZNF766	Q5HY98	468 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	AARS2	Q5JTZ9	985 aa	Known RBP	12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	MTFR2	Q6P444	385 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	XKRX	Q6PP77	449 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	LANCL3	Q6ZV70	420 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	PLD3	Q8IV08	490 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	RAB42	Q8N4Z0	105 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	PPFIBP2	Q8ND30	876 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	ACRBP	Q8NEB7	543 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	SUN3	Q8TAQ9	357 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	BIRC8	Q96P09	236 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	SIGLEC12	Q96PQ1	595 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	PANX3	Q96QZ0	392 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	NPAS2	Q99743	824 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	MRPS30	Q9NP92	439 aa	Known RBP	12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	ANKRD10	Q9NXR5	420 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	SPATA7	Q9P0W8	599 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	GNPTG	Q9UJJ9	305 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	AMFR	Q9UKV5	643 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	ZNF835	Q9Y2P0	537 aa		12.97	□□□□□ -0.33
SAMM50-204	ENST00000493161	BTNL10	A8MVZ5	291 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161		E7EVH7	732 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	FAM227A	F5H4B4	570 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	NIPSNAP2	O75323	286 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	NDUFS3	O75489	264 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	IFNB1	P01574	187 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	ANXA5	P08758	320 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	ERG	P11308	486 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	RPS3	P23396	243 aa	Known RBP eCLIP	12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	ARNT	P27540	789 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	NMBR	P28336	390 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	FMO4	P31512	558 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	FDFT1	P37268	417 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	CCNF	P41002	786 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	TTPA	P49638	278 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	RBPJ	Q06330	500 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	TSTA3	Q13630	321 aa	Predicted RBP	12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	GBX1	Q14549	363 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	OASL	Q15646	514 aa	Known RBP	12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	KCTD19	Q17RG1	926 aa	Predicted RBP	12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	ZNF425	Q6IV72	752 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	RAD9B	Q6WBX8	426 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	PRSS41	Q7RTY9	318 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	PEX26	Q7Z412	305 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	BEST3	Q8N1M1	668 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	PPHLN1	Q8NEY8	458 aa	Known RBP	12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	OR9A1P	Q8NGU1	263 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	MVB12A	Q96EY5	273 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	PKP4	Q99569	1192 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	TUBB6	Q9BUF5	446 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	VN1R1	Q9GZP7	353 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	RAB6B	Q9NRW1	208 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	TREX1	Q9NSU2	369 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	TAC3	Q9UHF0	121 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	PCYOX1	Q9UHG3	505 aa		12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	NCOA6	Q14686	2063 aa	Predicted RBP	12.96	□□□□□ -0.33
SAMM50-204	ENST00000493161	GOLGA8K	D6RF30	607 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	GOLGA8T	H3BQL2	631 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	HAT1	O14929	419 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	PRPF4	O43172	522 aa	Known RBP eCLIP	12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	LIAS	O43766	372 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	VPS26A	O75436	327 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	APRT	P07741	180 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	ZSCAN5DP	P0CG00	497 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	C8orf89	P0DMQ9	161 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	ESRRA	P11474	423 aa	Predicted RBP	12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	ICAM2	P13598	275 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	RPA3	P35244	121 aa	Predicted RBP	12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	CD96	P40200	585 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	SESN2	P58004	480 aa	Predicted RBP	12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	TUBA3C	Q13748	450 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	BTBD16	Q32M84	506 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	ACSBG2	Q5FVE4	666 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	PCID2	Q5JVF3	399 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	ACER2	Q5QJU3	275 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	ICE2	Q659A1	982 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	TUBA3E	Q6PEY2	450 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	CES3	Q6UWW8	571 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	UBL4B	Q8N7F7	174 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	MDS2	Q8NDY4	140 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	OR9A4	Q8NGU2	314 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	C1orf54	Q8WWF1	131 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	SMPDL3A	Q92484	453 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	MTFMT	Q96DP5	389 aa	Known RBP	12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	CALR3	Q96L12	384 aa	Known RBP	12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	GPR137	Q96N19	417 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	FOPNL	Q96NB1	174 aa		12.95	□□□□□ -0.34
SAMM50-204	ENST00000493161	CYTH2	Q99418	400 aa		12.95	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms