RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 KLRF1Q9NZS2 232 aa13.27□□□□□ -0.28
TRIM11-204ENST00000493030 MTMR11A4FU01 709 aa13.27□□□□□ -0.28
TRIM11-204ENST00000493030 SLC22A2O15244 555 aa13.27□□□□□ -0.28
TRIM11-204ENST00000493030 OR1I1O60431 355 aa13.27□□□□□ -0.28
TRIM11-204ENST00000493030 KCNE1P15382 129 aa13.27□□□□□ -0.28
TRIM11-204ENST00000493030 GKP32189 559 aa13.27□□□□□ -0.28
TRIM11-204ENST00000493030 CSTF2P33240 577 aaKnown RBP eCLIP13.27□□□□□ -0.28
TRIM11-204ENST00000493030 MAP3K8P41279 467 aa13.27□□□□□ -0.28
TRIM11-204ENST00000493030 KCNJ5P48544 419 aa13.27□□□□□ -0.28
TRIM11-204ENST00000493030 OGDHQ02218 1023 aa13.27□□□□□ -0.28
TRIM11-204ENST00000493030 LY6G5CQ5SRR4 150 aa13.27□□□□□ -0.28
TRIM11-204ENST00000493030 ZNF627Q7L945 461 aa13.27□□□□□ -0.28
TRIM11-204ENST00000493030 GOLGA7Q7Z5G4 137 aa13.27□□□□□ -0.28
TRIM11-204ENST00000493030 SYVN1Q86TM6 617 aa13.27□□□□□ -0.28
TRIM11-204ENST00000493030 SEC61A2Q9H9S3 476 aa13.27□□□□□ -0.28
TRIM11-204ENST00000493030 ZDHHC2Q9UIJ5 367 aa13.27□□□□□ -0.28
TRIM11-204ENST00000493030 PDCD5O14737 125 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 DLX3O60479 287 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 SEMA3DO95025 777 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 CDH1P12830 882 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 ZNF3P17036 446 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 TYRP1P17643 537 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 PPP1R8Q12972 351 aaKnown RBP13.27□□□□□ -0.29
TRIM11-204ENST00000493030 KCNJ11Q14654 390 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 ZNF461Q8TAF7 563 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 PIK3R3Q92569 461 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 CITED4Q96RK1 184 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 CGREF1Q99674 301 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 DPPA5A6NC42 116 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 ZNF99A8MXY4 864 aaPredicted RBP13.27□□□□□ -0.29
TRIM11-204ENST00000493030 LEFTY2O00292 366 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 SCDO00767 359 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 KDELR3O43731 214 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 PRKD3O94806 890 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 ZNF30P17039 623 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 CKMT2P17540 419 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 S100A1P23297 94 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 GBX2P52951 348 aaPredicted RBP13.27□□□□□ -0.29
TRIM11-204ENST00000493030 TYSND1Q2T9J0 566 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 OR51B5Q9H339 312 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 TIMMDC1Q9NPL8 285 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 RBMX2Q9Y388 322 aaKnown RBP13.27□□□□□ -0.29
TRIM11-204ENST00000493030 PIK3C2AO00443 1686 aa13.27□□□□□ -0.29
TRIM11-204ENST00000493030 PRAMEF33A0A0G2JMD5 474 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 FAM159BA6NKW6 160 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 ARPC2O15144 300 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 PRAMEF10O60809 474 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 INMTO95050 263 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 HAPLN1P10915 354 aaPredicted RBP13.26□□□□□ -0.29
TRIM11-204ENST00000493030 SLC25A11Q02978 314 aaKnown RBP13.26□□□□□ -0.29
TRIM11-204ENST00000493030 RAB30Q15771 203 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 PTCHD3Q3KNS1 767 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 SUSD1Q6UWL2 747 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 PDPRQ8NCN5 879 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 HSD3B7Q9H2F3 369 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 TRBC2A0A5B9 178 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 RPP14O95059 124 aaKnown RBP13.26□□□□□ -0.29
TRIM11-204ENST00000493030 OR3A3P47888 321 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 OR3A2P47893 321 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 PTPRCAPQ14761 206 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 RPS27LQ71UM5 84 aaKnown RBP13.26□□□□□ -0.29
TRIM11-204ENST00000493030 CCDC36Q8IYA8 594 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 SETD7Q8WTS6 366 aaKnown RBP13.26□□□□□ -0.29
TRIM11-204ENST00000493030 SHDQ96IW2 340 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 CCDC59Q9P031 241 aaKnown RBP13.26□□□□□ -0.29
TRIM11-204ENST00000493030 ABLIM1O14639 778 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 MID1O15344 667 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 CSN2P05814 226 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 ECHS1P30084 290 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 EEFSECP57772 596 aaKnown RBP13.26□□□□□ -0.29
TRIM11-204ENST00000493030 TMEM44Q2T9K0 475 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 ASTE1Q2TB18 679 aaPredicted RBP13.26□□□□□ -0.29
TRIM11-204ENST00000493030 KLHL36Q8N4N3 616 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 NFKBIDQ8NI38 313 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 CANT1Q8WVQ1 401 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 CNDP2Q96KP4 475 aaKnown RBP13.26□□□□□ -0.29
TRIM11-204ENST00000493030 UPB1Q9UBR1 384 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 PFDN2Q9UHV9 154 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 SLC45A1Q9Y2W3 748 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 PDLIM1O00151 329 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 HSD11B1P28845 292 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 OR12D2P58182 307 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 TIGD6Q17RP2 521 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 CEACAM20Q6UY09 585 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 PIGWQ7Z7B1 504 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 POF1BQ8WVV4 589 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 DNAJA4Q8WW22 397 aaPredicted RBP13.26□□□□□ -0.29
TRIM11-204ENST00000493030 EFCAB9A8MZ26 197 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 TRAPPC6AO75865 159 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 CBSLP0DN79 551 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 PGAM2P15259 253 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 CBSP35520 551 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 PREPP48147 710 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 DAG1Q14118 895 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 AMIGO1Q86WK6 493 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 FBXL18Q96ME1 805 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 ZNF395Q9H8N7 513 aaPredicted RBP13.26□□□□□ -0.29
TRIM11-204ENST00000493030 FNIP2Q9P278 1114 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 OAZ3Q9UMX2 235 aa13.26□□□□□ -0.29
TRIM11-204ENST00000493030 PCDHB11Q9Y5F2 797 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms