RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ST6GALNAC3Q8NDV1 305 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 ACTRT1Q8TDG2 376 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 THAP11Q96EK4 314 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 MMABQ96EY8 250 aaPredicted RBP11.86□□□□□ -0.51
COL6A1-205ENST00000492851 CCDC138Q96M89 665 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 C5orf34Q96MH7 638 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 DRC3Q9H069 523 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 ZBTB20Q9HC78 741 aaPredicted RBP11.86□□□□□ -0.51
COL6A1-205ENST00000492851 TMEM184CQ9NVA4 438 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 GALPQ9UBC7 116 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 TSR3Q9UJK0 312 aaKnown RBP11.86□□□□□ -0.51
COL6A1-205ENST00000492851 FBXO5Q9UKT4 447 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 NOVA2Q9UNW9 492 aaKnown RBP11.86□□□□□ -0.51
COL6A1-205ENST00000492851 NEU2Q9Y3R4 380 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 PTPN13Q12923 2485 aa11.86□□□□□ -0.51
COL6A1-205ENST00000492851 KCNE1BA0A087WTH5 132 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 DYTNA2CJ06 578 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 WIPF3A6NGB9 483 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 IDSB3KWA1 339 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 H0YIG0 161 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 GOLGA8MH3BSY2 632 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 SLC16A5O15375 505 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 ZSCAN12O43309 604 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 KIF5CO60282 957 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 SERPINA7P05543 415 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 C8GP07360 202 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 HIST1H2AGP0C0S8 130 aaPredicted RBP11.85□□□□□ -0.51
COL6A1-205ENST00000492851 HIST1H2ADP20671 130 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 MAGEA3P43357 314 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 RPS15AP62244 130 aaKnown RBP11.85□□□□□ -0.51
COL6A1-205ENST00000492851 CDC16Q13042 620 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 PPP1R7Q15435 360 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 HIF1AQ16665 826 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 VWA2Q5GFL6 755 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 CYHR1Q6ZMK1 362 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 UBE2R2Q712K3 238 aaPredicted RBP11.85□□□□□ -0.51
COL6A1-205ENST00000492851 DENND6AQ8IWF6 608 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 NAT8LQ8N9F0 302 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL6A1-205ENST00000492851 MS4A14Q96JA4 679 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 HIST1H2AHQ96KK5 128 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 SIGLEC10Q96LC7 697 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 C10orf90Q96M02 699 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 GPR21Q99679 349 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 HIST1H2AJQ99878 128 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 AARSD1Q9BTE6 412 aaKnown RBP11.85□□□□□ -0.51
COL6A1-205ENST00000492851 H2AFJQ9BTM1 129 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 ZNF160Q9HCG1 818 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 CCDC177Q9NQR7 707 aaPredicted RBP11.85□□□□□ -0.51
COL6A1-205ENST00000492851 FBXO6Q9NRD1 293 aaPredicted RBP11.85□□□□□ -0.51
COL6A1-205ENST00000492851 RIC8BQ9NVN3 520 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 TAS2R13Q9NYV9 303 aa11.85□□□□□ -0.51
COL6A1-205ENST00000492851 TRMT6Q9UJA5 497 aaKnown RBP11.85□□□□□ -0.51
COL6A1-205ENST00000492851 RUVBL1Q9Y265 456 aaKnown RBP11.85□□□□□ -0.51
COL6A1-205ENST00000492851 TNRC6AQ8NDV7 1962 aaKnown RBP11.85□□□□□ -0.51
COL6A1-205ENST00000492851 SPENQ96T58 3664 aaKnown RBP11.84□□□□□ -0.51
COL6A1-205ENST00000492851 IGKV1-8A0A0C4DH67 115 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 KRT87PA6NCN2 255 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 PABPN1LA6NDY0 278 aaKnown RBP11.84□□□□□ -0.51
COL6A1-205ENST00000492851 WFS1O76024 890 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 HAUS5O94927 633 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 BMP10O95393 424 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 EDN3P14138 238 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 PGAM1P18669 254 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 GRK3P35626 688 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 SLC1A2P43004 574 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 PER3P56645 1201 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 YBX1P67809 324 aaKnown RBP11.84□□□□□ -0.51
COL6A1-205ENST00000492851 SP140Q13342 867 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 HSP90AA5PQ58FG0 334 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 ZNF549Q6P9A3 640 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 LINC00696Q6ZRV3 163 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 KIAA0408Q6ZU52 694 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 KCNMB4Q86W47 210 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 FAR1Q8WVX9 515 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 METTL21AQ8WXB1 218 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 HAS2Q92819 552 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 PARVBQ9HBI1 364 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 PCYOX1Q9UHG3 505 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 TEKT2Q9UIF3 430 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 MED16Q9Y2X0 877 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 MRPS2Q9Y399 296 aaKnown RBP11.84□□□□□ -0.51
COL6A1-205ENST00000492851 SPTBP11277 2137 aa11.84□□□□□ -0.51
COL6A1-205ENST00000492851 PCSK5Q92824 1860 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 LOC102723996A0A087X1L8 192 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 TRAV17A0A0B4J275 112 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 H7BY64 318 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 MASP2O00187 686 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 MED26O95402 600 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 UQCRHP07919 91 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 PRR35P0CG20 571 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 COX6A1P12074 109 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 IL10P22301 178 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 ARG2P78540 354 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 Q0VFX4 171 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 CUL1Q13616 776 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 INAQ16352 499 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 HKDC1Q2TB90 917 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 SPANXN3Q5MJ09 141 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 FAM180AQ6UWF9 173 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms