RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 GPN3Q9UHW5 284 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE1-206ENST00000492796 TCFL5Q9UL49 500 aa10.19□□□□□ -0.78
CDC42SE1-206ENST00000492796 POLHQ9Y253 713 aa10.19□□□□□ -0.78
CDC42SE1-206ENST00000492796 FER1L5A0AVI2 2057 aa10.19□□□□□ -0.78
CDC42SE1-206ENST00000492796 HEATR5BQ9P2D3 2071 aa10.19□□□□□ -0.78
CDC42SE1-206ENST00000492796 SPTBP11277 2137 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 IGSF10Q6WRI0 2623 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 KCNE1BA0A087WTH5 132 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 A0A087WUV0 522 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 LOC105369274A0A096LPK9 316 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 LOC102723532A0A0G2JNH3 316 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 HYKKA2RU49 373 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 CDC14CA4D256 554 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 EIF4E1BA6NMX2 242 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 H0YGG7 62 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 H7BY64 318 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 HAT1O14929 419 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 ACSL3O95573 720 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 ONECUT2O95948 504 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 EIF2S1P05198 315 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 RHOXF2BP0C7M4 288 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 SFTPCP11686 197 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 NPPBP16860 134 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 ALAS2P22557 587 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 GRK3P35626 688 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 CCR10P46092 362 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 ARF3P61204 181 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 RPS15AP62244 130 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 RPS18P62269 152 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 ERV3-1Q14264 604 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 TGFBIQ15582 683 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 ZXDCQ2QGD7 858 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 MUM1Q2TAK8 710 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 PRTGQ2VWP7 1150 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 NKAIN1Q4KMZ8 207 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 CDKL4Q5MAI5 379 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 GARNL3Q5VVW2 1013 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 PRMT9Q6P2P2 845 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 RAPH1Q70E73 1250 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 TAOK1Q7L7X3 1001 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 CMC1Q7Z7K0 106 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 TBC1D1Q86TI0 1168 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 OR4N4Q8N0Y3 316 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 CSNK1A1LQ8N752 337 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 EIF1ADQ8N9N8 165 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 ABHD11Q8NFV4 315 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 THAP4Q8WY91 577 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 SLC39A7Q92504 469 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 ALKBH8Q96BT7 664 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 PYCR2Q96C36 320 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 THAP11Q96EK4 314 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 MVB12AQ96EY5 273 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 PRAP1Q96NZ9 151 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 OR2A5Q96R48 311 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 RUFY1Q96T51 708 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 RHOXF2Q9BQY4 288 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 ADNPQ9H2P0 1102 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 STARD5Q9NSY2 213 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 NFU1Q9UMS0 254 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 NBEAQ8NFP9 2946 aa10.18□□□□□ -0.78
CDC42SE1-206ENST00000492796 A0A087X1B8 175 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 CCDC189A1A4V9 331 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 PRPF4O43172 522 aaKnown RBP eCLIP10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 IPO13O94829 963 aaKnown RBP10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 ALBP02768 609 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 INHBAP08476 426 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 ABHD2P08910 425 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 SLC35E2BP0CK96 405 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 CDH1P12830 882 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 FOLR3P41439 243 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 SLC6A12P48065 614 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 SERPINB8P50452 374 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 CSRP3P50461 194 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 CCR8P51685 355 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 CSNK1G2P78368 415 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 IL10RAQ13651 578 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 CSHL1Q14406 222 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 UAP1Q16222 522 aaPredicted RBP10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 DEFB109BQ30KR1 87 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 LINC00303Q3SY05 128 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 ATP1A1-AS1Q5TC04 95 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 MLIPQ5VWP3 458 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 MRPL14Q6P1L8 145 aaKnown RBP10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 TRMT10CQ7L0Y3 403 aaKnown RBP10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 RAB43Q86YS6 212 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 KLHDC8AQ8IYD2 350 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 CNPY4Q8N129 248 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 TBC1D19Q8N5T2 526 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 OR2Y1Q8NGV0 311 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 APOBEC4Q8WW27 367 aaKnown RBP10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 SLC44A1Q8WWI5 657 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 SLC5A11Q8WWX8 675 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 KIAA1191Q96A73 305 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 RHBDF1Q96CC6 855 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 CABS1Q96KC9 395 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 C10orf90Q96M02 699 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 SARGQ9BW04 601 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 SLC26A1Q9H2B4 701 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 WDR54Q9H977 334 aa10.17□□□□□ -0.78
CDC42SE1-206ENST00000492796 CNOT10Q9H9A5 744 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms