RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	ARL4A	P40617	200 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	SSR1	P43307	286 aa	Known RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	AGFG1	P52594	562 aa	Known RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	CASP9	P55211	416 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	CDH6	P55285	790 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	TAS2R50	P59544	299 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	RPL7A	P62424	266 aa	Known RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	PPIA	P62937	165 aa	Known RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	PLGLB1	Q02325	96 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	TRIM14	Q14142	442 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	KRT31	Q15323	416 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	HADH	Q16836	314 aa	Known RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	LONRF2	Q1L5Z9	754 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	CLEC16A	Q2KHT3	1053 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	BOLA3	Q53S33	107 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	ZC3H12B	Q5HYM0	836 aa	Known RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	WASHC2D	Q5SRD0	308 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	CCDC122	Q5T0U0	273 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	ERMARD	Q5T6L9	678 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	WLS	Q5T9L3	541 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	WDR59	Q6PJI9	974 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	LANCL3	Q6ZV70	420 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	SEM1	Q6ZVN7	128 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	OTOA	Q7RTW8	1153 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	MAATS1	Q7Z4T9	603 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	TMC3	Q7Z5M5	1100 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	CPEB2	Q7Z5Q1	589 aa	Known RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	RPS19BP1	Q86WX3	136 aa	Known RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	PHF13	Q86YI8	300 aa	Predicted RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	PSTK	Q8IV42	348 aa	Known RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	MAP7D3	Q8IWC1	876 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	ATPAF2	Q8N5M1	289 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	TNIP2	Q8NFZ5	429 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	FLVCR1-AS1	Q8TAF5	88 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	M1AP	Q8TC57	530 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	AGPAT1	Q99943	283 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	CCM2	Q9BSQ5	444 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	GPR63	Q9BZJ6	419 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	EPB41L4B	Q9H329	900 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	ESRP2	Q9H6T0	727 aa	Known RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	C14orf105	Q9NVL8	296 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	ZNHIT6	Q9NWK9	470 aa	Known RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	ZNF629	Q9UEG4	869 aa	Predicted RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	ZC3H7B	Q9UGR2	993 aa	Known RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	AP4E1	Q9UPM8	1137 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	LIPG	Q9Y5X9	500 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	SCIN	Q9Y6U3	715 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	FITM1	A5D6W6	292 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	LGALS16	A8MUM7	142 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602		H3BRJ5	948 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	CDK2AP1	O14519	115 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	GPR39	O43194	453 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	SIAH2	O43255	324 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	UGT1A9	O60656	530 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	FTL	P02792	175 aa	Predicted RBP	5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	EIF2S1	P05198	315 aa	Known RBP	5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	TMIGD3	P0DMS9	266 aa	Predicted RBP	5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	GZMA	P12544	262 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	ATP1A3	P13637	1013 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	TCF4	P15884	667 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	UGT1A6	P19224	532 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	MSH3	P20585	1137 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	PSMA2	P25787	234 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	AKT1	P31749	480 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	SHMT2	P34897	504 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	SERPINB6	P35237	376 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	HCAR3	P49019	387 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	WNT3	P56703	355 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	JAM2	P57087	298 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	ACTG1	P63261	375 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	KLHL30	Q0D2K2	578 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	SQLE	Q14534	574 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	NFKBIB	Q15653	356 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	EXT1	Q16394	746 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	PPP2R5E	Q16537	467 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	PPP6R3	Q5H9R7	873 aa	Predicted RBP	5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	LDLRAP1	Q5SW96	308 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	CCDC183	Q5T5S1	534 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	MFSD4B	Q5TF39	518 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	CCDC70	Q6NSX1	233 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	ABHD17C	Q6PCB6	329 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	POMZP3	Q6PJE2	187 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	MON1B	Q7L1V2	547 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	CPNE8	Q86YQ8	564 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	RFLNB	Q8N5W9	214 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	TEX26	Q8N6G2	289 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	LRRN4	Q8WUT4	740 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	SARAF	Q96BY9	339 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	CAPZA3	Q96KX2	299 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	MCEE	Q96PE7	176 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	MAK16	Q9BXY0	300 aa	Known RBP	5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	ADGRE3	Q9BY15	652 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	MVB12B	Q9H7P6	319 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	ZNF696	Q9H7X3	374 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	UGT1A7	Q9HAW7	530 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	UGT1A10	Q9HAW8	530 aa		5.02	□□□□□ -1.61
SEC13-219	ENST00000492602	UGT1A8	Q9HAW9	530 aa		5.02	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms