RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 DPM1O60762 260 aa25.85■■□□□ 1.73
SH3GL3-204ENST00000492099 MED26O95402 600 aa25.85■■□□□ 1.73
SH3GL3-204ENST00000492099 FDXRP22570 491 aa25.85■■□□□ 1.73
SH3GL3-204ENST00000492099 CCND1P24385 295 aa25.85■■□□□ 1.73
SH3GL3-204ENST00000492099 TBPL1P62380 186 aa25.85■■□□□ 1.73
SH3GL3-204ENST00000492099 FOXK1P85037 733 aa25.85■■□□□ 1.73
SH3GL3-204ENST00000492099 OCA2Q04671 838 aa25.85■■□□□ 1.73
SH3GL3-204ENST00000492099 COLEC12Q5KU26 742 aa25.85■■□□□ 1.73
SH3GL3-204ENST00000492099 PRAMEF13Q5VWM6 474 aa25.85■■□□□ 1.73
SH3GL3-204ENST00000492099 SEMA3GQ9NS98 782 aa25.85■■□□□ 1.73
SH3GL3-204ENST00000492099 MOCS1Q9NZB8 636 aa25.85■■□□□ 1.73
SH3GL3-204ENST00000492099 CTSFQ9UBX1 484 aa25.85■■□□□ 1.73
SH3GL3-204ENST00000492099 ZNF282Q9UDV7 671 aaPredicted RBP25.85■■□□□ 1.73
SH3GL3-204ENST00000492099 CDC23Q9UJX2 597 aa25.85■■□□□ 1.73
SH3GL3-204ENST00000492099 RUVBL1Q9Y265 456 aaKnown RBP25.85■■□□□ 1.73
SH3GL3-204ENST00000492099 CCDC88CQ9P219 2028 aa25.85■■□□□ 1.73
SH3GL3-204ENST00000492099 PABPN1LA6NDY0 278 aaKnown RBP25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 H7BY64 318 aa25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 PRPF4O43172 522 aaKnown RBP eCLIP25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 TSPAN12O95859 305 aa25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 CALCOCO2Q13137 446 aa25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 VWA5B1Q5TIE3 1220 aa25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 AGTRAPQ6RW13 159 aa25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 GALNT16Q8N428 558 aa25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 DTWD1Q8N5C7 304 aa25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 VPS50Q96JG6 964 aa25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 PRAP1Q96NZ9 151 aa25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 ERP44Q9BS26 406 aa25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 TRIM54Q9BYV2 358 aa25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 SOX17Q9H6I2 414 aaPredicted RBP25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 ATP13A2Q9NQ11 1180 aa25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 CUEDC1Q9NWM3 386 aaPredicted RBP25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 C5AR2Q9P296 337 aa25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 ANKRD12Q6UB98 2062 aa25.84■■□□□ 1.73
SH3GL3-204ENST00000492099 PCSK5Q92824 1860 aa25.83■■□□□ 1.73
SH3GL3-204ENST00000492099 HAT1O14929 419 aa25.83■■□□□ 1.73
SH3GL3-204ENST00000492099 SOX8P57073 446 aa25.83■■□□□ 1.73
SH3GL3-204ENST00000492099 ETF1P62495 437 aaKnown RBP25.83■■□□□ 1.73
SH3GL3-204ENST00000492099 FASTKD3Q14CZ7 662 aaKnown RBP25.83■■□□□ 1.73
SH3GL3-204ENST00000492099 SLC26A11Q86WA9 606 aa25.83■■□□□ 1.73
SH3GL3-204ENST00000492099 TMEM151BQ8IW70 566 aa25.83■■□□□ 1.73
SH3GL3-204ENST00000492099 ZBED8Q8IZ13 594 aa25.83■■□□□ 1.73
SH3GL3-204ENST00000492099 SYNPO2LQ9H987 977 aa25.83■■□□□ 1.73
SH3GL3-204ENST00000492099 NSMCE4AQ9NXX6 385 aa25.83■■□□□ 1.73
SH3GL3-204ENST00000492099 WHRNQ9P202 907 aa25.83■■□□□ 1.73
SH3GL3-204ENST00000492099 MYO18BQ8IUG5 2567 aa25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 ALPPP05187 535 aa25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 FBLP22087 321 aaKnown RBP25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 AP1S2P56377 157 aa25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 AIMP2Q13155 320 aaKnown RBP25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 NAE1Q13564 534 aa25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 MYBPC3Q14896 1274 aa25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 IGFBP7Q16270 282 aa25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 PHKG1Q16816 387 aa25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 HKDC1Q2TB90 917 aa25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 MBOAT1Q6ZNC8 495 aa25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 C17orf64Q86WR6 236 aa25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 STT3BQ8TCJ2 826 aa25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 MIEF2Q96C03 454 aa25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 PDLIM5Q96HC4 596 aaKnown RBP25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 OLFM1Q99784 485 aa25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 ATG10Q9H0Y0 220 aa25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 ARL15Q9NXU5 204 aa25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 HEATR5BQ9P2D3 2071 aa25.82■■□□□ 1.72
SH3GL3-204ENST00000492099 IGLV3-12A0A075B6K2 115 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 SOCS6O14544 535 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 ZGLP1P0C6A0 271 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 RPS15AP62244 130 aaKnown RBP25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 MRPS25P82663 173 aaKnown RBP25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 ILF2Q12905 390 aaKnown RBP25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 RAPSNQ13702 412 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 DSG2Q14126 1118 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 RBBP7Q16576 425 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 NDUFA9Q16795 377 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 NADK2Q4G0N4 442 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 SHISA6Q6ZSJ9 500 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 STRA8Q7Z7C7 330 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 ZC3HC1Q86WB0 502 aaKnown RBP25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 PYROXD1Q8WU10 500 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 THAP11Q96EK4 314 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 CRB3Q9BUF7 120 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 SGPP1Q9BX95 441 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 FBXL4Q9UKA2 621 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 PSAT1Q9Y617 370 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 HS3ST3B1Q9Y662 390 aa25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 TNRC6AQ8NDV7 1962 aaKnown RBP25.81■■□□□ 1.72
SH3GL3-204ENST00000492099 KCNE1BA0A087WTH5 132 aa25.8■■□□□ 1.72
SH3GL3-204ENST00000492099 TTLL8A6PVC2 850 aa25.8■■□□□ 1.72
SH3GL3-204ENST00000492099 RAD51CO43502 376 aa25.8■■□□□ 1.72
SH3GL3-204ENST00000492099 IPO13O94829 963 aaKnown RBP25.8■■□□□ 1.72
SH3GL3-204ENST00000492099 ENO2P09104 434 aaPredicted RBP25.8■■□□□ 1.72
SH3GL3-204ENST00000492099 MLLT10P55197 1068 aa25.8■■□□□ 1.72
SH3GL3-204ENST00000492099 KLC1Q07866 573 aa25.8■■□□□ 1.72
SH3GL3-204ENST00000492099 FAM53BQ14153 422 aa25.8■■□□□ 1.72
SH3GL3-204ENST00000492099 DUPD1Q68J44 220 aa25.8■■□□□ 1.72
SH3GL3-204ENST00000492099 CAPN13Q6MZZ7 669 aaPredicted RBP25.8■■□□□ 1.72
SH3GL3-204ENST00000492099 KIRREL2Q6UWL6 708 aa25.8■■□□□ 1.72
SH3GL3-204ENST00000492099 LCTLQ6UWM7 567 aa25.8■■□□□ 1.72
SH3GL3-204ENST00000492099 PLD3Q8IV08 490 aa25.8■■□□□ 1.72
SH3GL3-204ENST00000492099 ARHGEF39Q8N4T4 335 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms