RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 ANKRD11Q6UB99 2663 aaPredicted RBP15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CELSR3Q9NYQ7 3312 aa15.58■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PCM1Q15154 2024 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 LOC105369274A0A096LPK9 316 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 LOC102723532A0A0G2JNH3 316 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CCDC189A1A4V9 331 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 FITM1A5D6W6 292 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ZNF891A8MT65 544 aaPredicted RBP15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 TRIM49D1C9J1S8 452 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 H0YGG7 62 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 KERAO60938 352 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 KRT37O76014 449 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SNRPAP09012 282 aaKnown RBP15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 AGXTP21549 392 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 F8A1P23610 371 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 GCGRP47871 477 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SLC6A12P48065 614 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ARF3P61204 181 aaPredicted RBP15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CSNK1G2P78368 415 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 WASHC2DQ5SRD0 308 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 LGSNQ5TDP6 509 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 YOD1Q5VVQ6 348 aaPredicted RBP15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ZNF385CQ66K41 422 aaPredicted RBP15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SULT1C3Q6IMI6 304 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ADGRD1Q6QNK2 874 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 GPR155Q7Z3F1 870 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ISCA2Q86U28 154 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 KLHDC8AQ8IYD2 350 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 OR4N4Q8N0Y3 316 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PDPRQ8NCN5 879 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 STARD8Q92502 1023 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 RERGQ96A58 199 aaPredicted RBP15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 DPH2Q9BQC3 489 aaPredicted RBP15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CCDC77Q9BR77 488 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CHST8Q9H2A9 424 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 STARD5Q9NSY2 213 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 WWOXQ9NZC7 414 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 NUDT4Q9NZJ9 180 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CD274Q9NZQ7 290 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 DHCR7Q9UBM7 475 aaKnown RBP15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 FETUBQ9UGM5 382 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 IL17BQ9UHF5 180 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 KCND3Q9UK17 655 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 DYRK1BQ9Y463 629 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 AHCTF1Q8WYP5 2266 aa15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 KMT2BQ9UMN6 2715 aaPredicted RBP15.57■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 EPG5Q9HCE0 2579 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ZFHX4Q86UP3 3567 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SUPT3HB4E1H0 165 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 KATNA1O75449 491 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SUPT3HO75486 399 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 IPO13O94829 963 aaKnown RBP15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 WDR47O94967 919 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 KLHL2O95198 593 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 EIF2S1P05198 315 aaKnown RBP15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 GRK3P35626 688 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CCR8P51685 355 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 RPS15AP62244 130 aaKnown RBP15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ACAP2Q15057 778 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 C18orf21Q32NC0 220 aaPredicted RBP15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 C1orf189Q5VU69 101 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 LCN10Q6JVE6 187 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 WDR93Q6P2C0 686 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 KLC3Q6P597 504 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 FAM198BQ6UWH4 519 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PLD3Q8IV08 490 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ABHD11Q8NFV4 315 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 RHEBL1Q8TAI7 183 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SLC5A11Q8WWX8 675 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 NEIL2Q969S2 332 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 MTBPQ96DY7 904 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 TSNARE1Q96NA8 513 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 GBP5Q96PP8 586 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 OR2A5Q96R48 311 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ATOH8Q96SQ7 321 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 TMEM79Q9BSE2 394 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SYNPO2LQ9H987 977 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CNOT10Q9H9A5 744 aaKnown RBP15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CUTCQ9NTM9 273 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PSMC3IPQ9P2W1 217 aaPredicted RBP15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SLC22A14Q9Y267 594 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PCDHGA6Q9Y5G7 932 aa15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 MRPS18BQ9Y676 258 aaKnown RBP15.56■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ANKRD12Q6UB98 2062 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 A0A1B0GX78 115 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 FEZF1A0PJY2 475 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SYCE1LA8MT33 242 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 C9J4A7 227 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 DSCR3O14972 297 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 TAPBPO15533 448 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 RAB40ALP0C0E4 278 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ALAS2P22557 587 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 GGT5P36269 586 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 GDF5P43026 501 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 GLRBP48167 497 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 KCNC1P48547 511 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 RPS15P62841 145 aaKnown RBP15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 DCDP81605 110 aaKnown RBP15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 MC1RQ01726 317 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 COL9A2Q14055 689 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms