RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SULT2A1Q06520 285 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 HYAL1Q12794 435 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 ITGA9Q13797 1035 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 PTK6Q13882 451 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 KRT81Q14533 505 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 OPCMLQ14982 345 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 GFI1BQ5VTD9 330 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 ANKRD33Q7Z3H0 272 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 NOTCH2NLQ7Z3S9 236 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 C4orf19Q8IY42 314 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 CCDC63Q8NA47 563 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 GPRC5AQ8NFJ5 357 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 DBF4BQ8NFT6 615 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 OR5AP2Q8NGF4 316 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 OR1L3Q8NH93 324 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 MRGPRDQ8TDS7 321 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 SLC26A7Q8TE54 656 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 METTL21AQ8WXB1 218 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 PIK3R3Q92569 461 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 NR4A3Q92570 626 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 DNASE1L2Q92874 299 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 CENPTQ96BT3 561 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 GMPPAQ96IJ6 420 aaPredicted RBP3.47□□□□□ -1.85
CD46-216ENST00000490278 C10orf90Q96M02 699 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 CCDC114Q96M63 670 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 NDNQ99608 321 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 FUCA2Q9BTY2 467 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 BARHL1Q9BZE3 327 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 P2RY12Q9H244 342 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 VPS33BQ9H267 617 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 SCRT2Q9NQ03 307 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 EPHA6Q9UF33 1036 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 RASAL2Q9UJF2 1139 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 PPP2R2CQ9Y2T4 447 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 IL16Q14005 1332 aa3.46□□□□□ -1.85
CD46-216ENST00000490278 IGSF1Q8N6C5 1336 aa3.46□□□□□ -1.85
CD46-216ENST00000490278 C17orf105B2RV13 164 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 F8VVB4 439 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 F8VWA3 439 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 H0Y626 953 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 CCL24O00175 119 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 KRT33AO76009 404 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 SLU7O95391 586 aaKnown RBP3.46□□□□□ -1.86
CD46-216ENST00000490278 SEC24AO95486 1093 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 IGLV1-44P01699 117 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 VTNP04004 478 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 ATP1B1P05026 303 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 SLC2A2P11168 524 aaPredicted RBP3.46□□□□□ -1.86
CD46-216ENST00000490278 LBPP18428 481 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 PSMB4P28070 264 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 ALDH1B1P30837 517 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 SFTPDP35247 375 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 DNA2P51530 1060 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 LBX1P52954 281 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 SNRPD1P62314 119 aaKnown RBP3.46□□□□□ -1.86
CD46-216ENST00000490278 ALDH1L2Q3SY69 923 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 ZRANB3Q5FWF4 1079 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 FAM166AQ6J272 317 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 SLC25A47Q6Q0C1 308 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 LACC1Q8IV20 430 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 KLHL7Q8IXQ5 586 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 APCDD1Q8J025 514 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 RAB42Q8N4Z0 105 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 SLC37A3Q8NCC5 494 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 OR10G8Q8NGN5 311 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.46□□□□□ -1.86
CD46-216ENST00000490278 APOBEC4Q8WW27 367 aaKnown RBP3.46□□□□□ -1.86
CD46-216ENST00000490278 ARHGAP45Q92619 1136 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 RIT1Q92963 219 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 BSCL2Q96G97 398 aaPredicted RBP3.46□□□□□ -1.86
CD46-216ENST00000490278 MAGED4Q96JG8 741 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 AK8Q96MA6 479 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 GDAP1L1Q96MZ0 367 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 CDCA3Q99618 268 aaPredicted RBP3.46□□□□□ -1.86
CD46-216ENST00000490278 LPAR4Q99677 370 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 MLPHQ9BV36 600 aaPredicted RBP3.46□□□□□ -1.86
CD46-216ENST00000490278 WDR13Q9H1Z4 485 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 RIMS4Q9H426 269 aaPredicted RBP3.46□□□□□ -1.86
CD46-216ENST00000490278 MINDY3Q9H8M7 445 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 MAN2C1Q9NTJ4 1040 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 ATAD3AQ9NVI7 634 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 RNF186Q9NXI6 227 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 DNAJB9Q9UBS3 223 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 ITGA11Q9UKX5 1188 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 MRPS28Q9Y2Q9 187 aaKnown RBP3.46□□□□□ -1.86
CD46-216ENST00000490278 KCNK7Q9Y2U2 307 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 PYGO1Q9Y3Y4 419 aa3.46□□□□□ -1.86
CD46-216ENST00000490278 MEIOCA2RUB1 952 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 SNURFLB1AK76 121 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 TMEM150CB9EJG8 249 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 NR5A2O00482 541 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 FLRT2O43155 660 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 RLN1P04808 185 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 F3P13726 295 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 ZNF26P17031 533 aaPredicted RBP3.45□□□□□ -1.86
CD46-216ENST00000490278 SOAT1P35610 550 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 KRT2P35908 639 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 ATP12AP54707 1039 aa3.45□□□□□ -1.86
CD46-216ENST00000490278 HNRNPDQ14103 355 aaKnown RBP3.45□□□□□ -1.86
CD46-216ENST00000490278 TRIM29Q14134 588 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms