RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 EIF2S3P41091 472 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 GSDMDP57764 484 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 SIRPAP78324 504 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 MRPS34P82930 218 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 TFAP4Q01664 338 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 NAE1Q13564 534 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 KRT33BQ14525 404 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 PPP1R7Q15435 360 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 SOWAHAQ2M3V2 549 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 NADK2Q4G0N4 442 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 ESCO2Q56NI9 601 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 C6orf10Q5SRN2 563 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 PRAMEF19Q5SWL8 479 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 ASPHD1Q5U4P2 390 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 ALS2CLQ60I27 953 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 NSUN5P2Q63ZY6 315 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 PSRC1Q6PGN9 363 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 BTNL8Q6UX41 500 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 ERASQ7Z444 233 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 ASPGQ86U10 573 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 KLBQ86Z14 1044 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 SPATA2LQ8IUW3 424 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 MCEMP1Q8IX19 187 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 PDCL2Q8N4E4 241 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 EIF1ADQ8N9N8 165 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 C9orf43Q8TAL5 461 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 TBC1D16Q8TBP0 767 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 TMEM174Q8WUU8 243 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 TMEM170AQ8WVE7 144 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 CKAP2Q8WWK9 683 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 CASP10Q92851 521 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 EEF2KMTQ96G04 330 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 ZC3HAV1LQ96H79 300 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 SLC41A2Q96JW4 573 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 ZNF583Q96ND8 569 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 PSKH2Q96QS6 385 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 FEVQ99581 238 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 GFI1Q99684 422 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 BCL7BQ9BQE9 202 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 GPR61Q9BZJ8 451 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 LSG1Q9H089 658 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 RAB17Q9H0T7 212 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 SIRPDQ9H106 197 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 YY1AP1Q9H869 796 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 C17orf75Q9HAS0 396 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 GPN1Q9HCN4 374 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 DNAJC4Q9NNZ3 241 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 KLHL1Q9NR64 748 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 FAM118AQ9NWS6 357 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 CNOT2Q9NZN8 540 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 RHCGQ9UBD6 479 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 LAMP3Q9UQV4 416 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 EXOC6BQ9Y2D4 811 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 CARD8Q9Y2G2 431 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 CPS1P31327 1500 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 UBE4BO95155 1302 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 TECPR2O15040 1411 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 YTHDC2Q9H6S0 1430 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 A0A087WZY1 265 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 MACROD2A1Z1Q3 448 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 GSAPA4D1B5 854 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 DPPA5A6NC42 116 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 TMEM8BA6NDV4 472 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 MFSD2BA6NFX1 497 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 C4orf47A7E2U8 309 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 H0YIN7 160 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 TNFRSF13BO14836 293 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 KIF5CO60282 957 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 GPC4O75487 556 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 MOCS3O95396 460 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 PLGP00747 810 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 FGF4P08620 206 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 HOXB5P09067 269 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 DANCRP0C864 163 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 EPB41P11171 864 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 TGM2P21980 687 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 ACAT1P24752 427 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 CCND2P30279 289 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 SLC6A6P31641 620 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 METAP2P50579 478 aaKnown RBP eCLIP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 CNN1P51911 297 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 ZXDBP98169 803 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 FUT7Q11130 342 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 SCGB2A2Q13296 93 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 LPIN1Q14693 890 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 PNLIPRP3Q17RR3 467 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 TCTN1Q2MV58 587 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 KIAA1755Q5JYT7 1200 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 CES5AQ6NT32 575 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 PQLC2Q6ZP29 291 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 ATG9AQ7Z3C6 839 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 TAF8Q7Z7C8 310 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 PARP16Q8N5Y8 322 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 MINDY2Q8NBR6 621 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 OR2AJ1Q8NGZ0 328 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 FAR1Q8WVX9 515 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 OIT3Q8WWZ8 545 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 NSMCE2Q96MF7 247 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 MYADMQ96S97 322 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 SMC6Q96SB8 1091 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms