RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 TK2O00142 265 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 DSCR3O14972 297 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 ZNF500O60304 480 aaPredicted RBP16.58■□□□□ 0.24
MDC1-206ENST00000489540 ONECUT2O95948 504 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 CAPN1P07384 714 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 INHBAP08476 426 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 GRK3P35626 688 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 ERV3-1Q14264 604 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 CSHL1Q14406 222 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 NCF4Q15080 339 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 TBR1Q16650 682 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 PRTGQ2VWP7 1150 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 BORAQ6PGQ7 559 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 FAM198BQ6UWH4 519 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 CMC1Q7Z7K0 106 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 TBC1D1Q86TI0 1168 aaPredicted RBP16.58■□□□□ 0.24
MDC1-206ENST00000489540 GPSM1Q86YR5 675 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 CSNK1A1LQ8N752 337 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 ENDOVQ8N8Q3 282 aaKnown RBP16.58■□□□□ 0.24
MDC1-206ENST00000489540 ABHD11Q8NFV4 315 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 SLC44A1Q8WWI5 657 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 KIAA1191Q96A73 305 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 PYCR2Q96C36 320 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 RUFY1Q96T51 708 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 NMRAL1Q9HBL8 299 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 NDOR1Q9UHB4 597 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 TLK1Q9UKI8 766 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 PADI2Q9Y2J8 665 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 ACOT9Q9Y305 439 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 A0A087X1B8 175 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 HAT1O14929 419 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 SLC35E2BP0CK96 405 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 MSH2P43246 934 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 SERPINB9P50453 376 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 CCR8P51685 355 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 RPS15AP62244 130 aaKnown RBP16.57■□□□□ 0.24
MDC1-206ENST00000489540 CSNK1G2P78368 415 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 TGFBIQ15582 683 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 UGT8Q16880 541 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 MUM1Q2TAK8 710 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 SOWAHCQ53LP3 525 aaPredicted RBP16.57■□□□□ 0.24
MDC1-206ENST00000489540 UBAP2Q5T6F2 1119 aaKnown RBP16.57■□□□□ 0.24
MDC1-206ENST00000489540 GARNL3Q5VVW2 1013 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 MLIPQ5VWP3 458 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 TCAIMQ8N3R3 496 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 LRRN4CLQ8ND94 238 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 STAG3L4Q8TBR4 150 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 EXTL1Q92935 676 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 ARHGAP9Q9BRR9 750 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 UNKQ9C0B0 810 aaKnown RBP16.57■□□□□ 0.24
MDC1-206ENST00000489540 TCFL5Q9UL49 500 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 KCNE2Q9Y6J6 123 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 ZFYVE26Q68DK2 2539 aa16.57■□□□□ 0.24
MDC1-206ENST00000489540 CCDC189A1A4V9 331 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 HMX2A2RU54 273 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 ABHD2P08910 425 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 LTA4HP09960 611 aaKnown RBP16.56■□□□□ 0.24
MDC1-206ENST00000489540 CDH1P12830 882 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 PMS2P54278 862 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 DEFB109BQ30KR1 87 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 LINC00303Q3SY05 128 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 SULT1C3Q6IMI6 304 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 PRMT9Q6P2P2 845 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 TAOK1Q7L7X3 1001 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 THOC6Q86W42 341 aaKnown RBP16.56■□□□□ 0.24
MDC1-206ENST00000489540 THAP4Q8WY91 577 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 RHBDF1Q96CC6 855 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 OR4K3Q96R72 315 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 ZNF180Q9UJW8 692 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 POLHQ9Y253 713 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 DYRK1BQ9Y463 629 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 CFAP47Q6ZTR5 3102 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 CHD6Q8TD26 2715 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 SPTBP11277 2137 aa16.56■□□□□ 0.24
MDC1-206ENST00000489540 CDC14CA4D256 554 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 KRT38O76015 456 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 ALBP02768 609 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 C2P06681 752 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 CNTFP26441 200 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 TYK2P29597 1187 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 CCR10P46092 362 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 SERPINB8P50452 374 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 RPS18P62269 152 aaKnown RBP16.55■□□□□ 0.24
MDC1-206ENST00000489540 BMPR2Q13873 1038 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 FAM83EQ2M2I3 478 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 TEX35Q5T0J7 233 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 PCSK4Q6UW60 755 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 OVCH1Q7RTY7 1134 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 ISCA2Q86U28 154 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 PLD3Q8IV08 490 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 KLHDC8AQ8IYD2 350 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 TBC1D19Q8N5T2 526 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 OR4K1Q8NGD4 311 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 APOBEC4Q8WW27 367 aaKnown RBP16.55■□□□□ 0.24
MDC1-206ENST00000489540 SLC5A11Q8WWX8 675 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 FKBP10Q96AY3 582 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 PTERQ96BW5 349 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 MVB12AQ96EY5 273 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 CABS1Q96KC9 395 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 PAFAH2Q99487 392 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms