RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 IGHEP01854 428 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 VTNP04004 478 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 CCDC175P0C221 793 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 TSPY3P0CV98 308 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 TSPY8P0CW00 308 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 VDRP11473 427 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 CD27P26842 260 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 TAF6P49848 677 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 CYCSP99999 105 aaKnown RBP3.43□□□□□ -1.86
SSR1-209ENST00000488834 TSPY1Q01534 308 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 MZT1Q08AG7 82 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 OPCMLQ14982 345 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 PSMD6Q15008 389 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 EFTUD2Q15029 972 aaKnown RBP eCLIP3.43□□□□□ -1.86
SSR1-209ENST00000488834 NOTUMQ6P988 496 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 ZNF613Q6PF04 617 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 DOK6Q6PKX4 331 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 ENPP7Q6UWV6 458 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.43□□□□□ -1.86
SSR1-209ENST00000488834 ZNRF4Q8WWF5 429 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 PGM2Q96G03 612 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 NSMCE3Q96MG7 304 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 SERINC2Q96SA4 455 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 MAP3K3Q99759 626 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 RSPH9Q9H1X1 276 aaPredicted RBP3.43□□□□□ -1.86
SSR1-209ENST00000488834 SNX25Q9H3E2 840 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 FN3KQ9H479 309 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 RNF121Q9H920 327 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 NOL7Q9UMY1 257 aaKnown RBP3.43□□□□□ -1.86
SSR1-209ENST00000488834 MOB4Q9Y3A3 225 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 SELENOKQ9Y6D0 94 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 CSNK1G3Q9Y6M4 447 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 RPGRIP1LQ68CZ1 1315 aa3.43□□□□□ -1.86
SSR1-209ENST00000488834 A0A1W2PR80 420 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 CASTOR2A6NHX0 329 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 TEX28O15482 410 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 ATP1B1P05026 303 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 CYP2A7P20853 494 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 UGT1A4P22310 534 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 HLA-FP30511 346 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 DEKP35659 375 aaKnown RBP3.42□□□□□ -1.86
SSR1-209ENST00000488834 PPP5CP53041 499 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 XGP55808 180 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 UBASH3AP57075 661 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 DLK1P80370 383 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 MS4A2Q01362 244 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 CDH18Q13634 790 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 TRIM29Q14134 588 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 COG2Q14746 738 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 TMEM132DQ14C87 1099 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 MTHFSDQ2M296 383 aaKnown RBP3.42□□□□□ -1.86
SSR1-209ENST00000488834 KRBOX4Q5JUW0 171 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 C1orf141Q5JVX7 400 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 RPUSD3Q6P087 351 aaKnown RBP3.42□□□□□ -1.86
SSR1-209ENST00000488834 PPP1R21Q6ZMI0 780 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 FCRLAQ7L513 359 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 ADCK2Q7Z695 626 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 ANKRD13CQ8N6S4 541 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 CCDC63Q8NA47 563 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 MAPK1IP1LQ8NDC0 245 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 NUP37Q8NFH4 326 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 GATAD1Q8WUU5 269 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 RADILQ96JH8 1075 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 ATOH8Q96SQ7 321 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 RBM4BQ9BQ04 359 aaKnown RBP3.42□□□□□ -1.86
SSR1-209ENST00000488834 PFDN4Q9NQP4 134 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 NUDT4Q9NZJ9 180 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 POLLQ9UGP5 575 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 DCAF1Q9Y4B6 1507 aa3.42□□□□□ -1.86
SSR1-209ENST00000488834 A0A087WUV0 522 aaPredicted RBP3.41□□□□□ -1.86
SSR1-209ENST00000488834 A0A1W2PPK0 400 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 ERI2A8K979 691 aaKnown RBP3.41□□□□□ -1.86
SSR1-209ENST00000488834 LUC7L3O95232 432 aaKnown RBP3.41□□□□□ -1.86
SSR1-209ENST00000488834 ZSCAN5DPP0CG00 497 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 STAG3L1P0CL83 205 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 GP1BBP13224 206 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 SP100P23497 879 aaPredicted RBP3.41□□□□□ -1.86
SSR1-209ENST00000488834 ACAT1P24752 427 aaKnown RBP3.41□□□□□ -1.86
SSR1-209ENST00000488834 ELAVL4P26378 380 aaKnown RBP3.41□□□□□ -1.86
SSR1-209ENST00000488834 CALRP27797 417 aaKnown RBP3.41□□□□□ -1.86
SSR1-209ENST00000488834 SFTPDP35247 375 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 HNF4AP41235 474 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 RASGEF1BQ0VAM2 473 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 FASTKD3Q14CZ7 662 aaKnown RBP3.41□□□□□ -1.86
SSR1-209ENST00000488834 PTPN14Q15678 1187 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 EXT1Q16394 746 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 CTU2Q2VPK5 515 aaKnown RBP3.41□□□□□ -1.86
SSR1-209ENST00000488834 GPR33Q49SQ1 333 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 TAF1BQ53T94 588 aaPredicted RBP3.41□□□□□ -1.86
SSR1-209ENST00000488834 C2CD6Q53TS8 623 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 FGD3Q5JSP0 725 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 C1QTNF12Q5T7M4 302 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 CES4AQ5XG92 561 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 Q6ZRP5 223 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 SLC24A5Q71RS6 500 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 CCDC186Q7Z3E2 898 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 ZER1Q7Z7L7 766 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 AMIGO1Q86WK6 493 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 CREBRFQ8IUR6 639 aa3.41□□□□□ -1.86
SSR1-209ENST00000488834 OR5T2Q8NGG2 359 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms