RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 RNASEH2BQ5TBB1 312 aaKnown RBP12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 ATG9BQ674R7 924 aa12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 B3GNTL1Q67FW5 361 aaPredicted RBP12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 UGT3A1Q6NUS8 523 aa12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 CUZD1Q86UP6 607 aa12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 AGGF1Q8N302 714 aaeCLIP12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 ARHGEF39Q8N4T4 335 aa12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 DTWD1Q8N5C7 304 aa12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 CISD2Q8N5K1 135 aaKnown RBP12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 ANP32BQ92688 251 aaKnown RBP12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 C19orf60Q96EN9 201 aa12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 LMF1Q96S06 567 aa12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 OSBPL9Q96SU4 736 aa12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 GPR21Q99679 349 aa12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 NAT9Q9BTE0 207 aa12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 AARSD1Q9BTE6 412 aaKnown RBP12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 TGIF2Q9GZN2 237 aa12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 AGPAT4Q9NRZ5 378 aa12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 COPG1Q9Y678 874 aaKnown RBP12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 PRRC2CQ9Y520 2896 aaKnown RBP12.44□□□□□ -0.42
ATPAF2-207ENST00000488753 ESPL1Q14674 2120 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 SYF2O95926 243 aaKnown RBP12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 ANXA5P08758 320 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 PGAM1P18669 254 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 TSFMP43897 325 aaKnown RBP12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 GLRBP48167 497 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 TLR1Q15399 786 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 NR6A1Q15406 480 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 NDUFA9Q16795 377 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 EIF2S3LQ2VIR3 472 aaKnown RBP12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 HSP90AA5PQ58FG0 334 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 VWA2Q5GFL6 755 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 THEMIS2Q5TEJ8 643 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 ISLR2Q6UXK2 745 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 PARP9Q8IXQ6 854 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 KBTBD2Q8IY47 623 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 LRRC56Q8IYG6 542 aaPredicted RBP12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 PPFIBP2Q8ND30 876 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 THOC3Q96J01 351 aaKnown RBP12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 DRC3Q9H069 523 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 PCBD2Q9H0N5 130 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 MKKSQ9NPJ1 570 aaPredicted RBP12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 TRPC4Q9UBN4 977 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 PCYOX1Q9UHG3 505 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 SNX12Q9UMY4 172 aa12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 NOVA2Q9UNW9 492 aaKnown RBP12.43□□□□□ -0.42
ATPAF2-207ENST00000488753 KCNE1BA0A087WTH5 132 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 NSG1A0A0A6YYJ2 146 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 IDSB3KWA1 339 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 ZSCAN12O43309 604 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 ALOX12BO75342 701 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 HAUS5O94927 633 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 C8GP07360 202 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 CYC1P08574 325 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 CXCR2P25025 360 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 IMPA1P29218 277 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 RGS4P49798 205 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 EMP2P54851 167 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 AP2B1P63010 937 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 MPP1Q00013 466 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 Q0VFX4 171 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 SP140Q13342 867 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 MFAP5Q13361 173 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 CRYMQ14894 314 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 PPP1R7Q15435 360 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 HIF1AQ16665 826 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 HKDC1Q2TB90 917 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 KIAA0408Q6ZU52 694 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 UBE2R2Q712K3 238 aaPredicted RBP12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 NDUFAF7Q7L592 441 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 PIWIL4Q7Z3Z4 852 aaKnown RBP12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 ADCK2Q7Z695 626 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 PCGF5Q86SE9 256 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 GALNT7Q86SF2 657 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 KCNMB4Q86W47 210 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 CNTN4Q8IWV2 1026 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 CPNE9Q8IYJ1 553 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 AMER3Q8N944 861 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 C2CD4AQ8NCU7 369 aaPredicted RBP12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 PRR7Q8TB68 274 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 DNAJB14Q8TBM8 379 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 MCOLN3Q8TDD5 553 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 SLCO2A1Q92959 643 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 THAP11Q96EK4 314 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 MMABQ96EY8 250 aaPredicted RBP12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 CCDC138Q96M89 665 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 FAM129AQ9BZQ8 928 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 SYNPO2LQ9H987 977 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 ZNF160Q9HCG1 818 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 CCDC177Q9NQR7 707 aaPredicted RBP12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 TMEM184CQ9NVA4 438 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 TAS2R13Q9NYV9 303 aa12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 STOX2Q9P2F5 926 aaPredicted RBP12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 PLEKHB1Q9UF11 243 aaPredicted RBP12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 TRMT6Q9UJA5 497 aaKnown RBP12.42□□□□□ -0.42
ATPAF2-207ENST00000488753 LOC102723996A0A087X1L8 192 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 ANKUB1A6NFN9 424 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 WIPF3A6NGB9 483 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 H0YIG0 161 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 HAT1O14929 419 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms